Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 MIR3122-201ENST00000577243 73 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 CYP2C61P-201ENST00000604072 290 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AC012493.3-201ENST00000604494 112 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AC064807.4-201ENST00000607201 407 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AF250324.2-201ENST00000608299 610 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AL590808.1-201ENST00000618696 141 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AC064859.1-201ENST00000624741 174 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 ZNF355P-201ENST00000427301 3216 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 CENPCP1-201ENST00000533085 2578 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 MIR449A-201ENST00000362113 91 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 RNU6-23P-201ENST00000363283 107 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 Y_RNA.256-201ENST00000364594 104 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 Y_RNA.318-201ENST00000365131 97 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 SNORA8-201ENST00000384574 139 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 MIR450B-201ENST00000401182 78 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 AC019129.1-201ENST00000403786 261 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 RNU2-41P-201ENST00000410991 178 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 RNU6-325P-201ENST00000411132 105 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 AC244636.1-201ENST00000421152 228 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 NDUFA5P4-201ENST00000436704 385 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 RPS29P11-201ENST00000496507 171 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 ATP5EP1-201ENST00000510257 156 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 AC008549.1-201ENST00000512900 643 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 MIR514B-201ENST00000516774 80 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 AP005639.2-201ENST00000527592 928 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 AC109635.3-201ENST00000529536 185 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 EIF1P4-201ENST00000572664 335 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 AL096840.1-201ENST00000603287 93 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 RPL17P51-201ENST00000605218 238 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 AL773524.1-201ENST00000614065 229 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 AC130454.1-201ENST00000622948 401 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 ZNF658B-202ENST00000615961 3375 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 AL359851.1-201ENST00000569460 4997 ntBASIC1.45□□□□□ -2.18
CCL28Q9NRJ3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 Y_RNA.38-201ENST00000362617 102 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 RNU6-1090P-201ENST00000364065 94 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 RNU6-128P-201ENST00000383976 107 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 Y_RNA.615-201ENST00000410769 117 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 RNA5SP508-201ENST00000411327 119 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 SNRPEP10-201ENST00000420249 274 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AL589823.1-201ENST00000429577 183 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AL645568.3-201ENST00000433683 316 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AL035666.1-201ENST00000446195 348 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 RPL23AP6-201ENST00000446637 472 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AC010486.1-201ENST00000511793 424 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 MRPS17P9-201ENST00000511924 393 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 RNU6-720P-201ENST00000516363 108 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AC087441.2-201ENST00000529141 262 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AC090517.1-201ENST00000569307 266 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 CPDP1-201ENST00000579660 283 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AC012557.2-201ENST00000605919 418 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AC104458.1-201ENST00000608243 463 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 AL590240.4-201ENST00000616908 390 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 U1.36-201ENST00000620684 176 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 LINC02555-201ENST00000563933 1951 ntBASIC1.44□□□□□ -2.18
CCL28Q9NRJ3 RNU1-76P-201ENST00000362903 159 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 RNU6-254P-201ENST00000363377 107 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 SNORD113-7-201ENST00000363762 77 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 RNA5SP493-201ENST00000364115 91 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 RNA5SP363-201ENST00000365072 115 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 SNORA32.2-201ENST00000384049 122 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 SNORA29-201ENST00000384183 140 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 MIR9-3-201ENST00000385084 90 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 RNA5SP501-201ENST00000410990 112 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 AC123900.1-201ENST00000420390 96 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 EIF4EP2-201ENST00000422816 654 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 USP9YP28-201ENST00000435142 589 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 snoU13.6-201ENST00000458785 104 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 TRBVA-201ENST00000498804 316 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 AC016957.1-201ENST00000534895 309 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 AC026371.1-201ENST00000551867 419 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 AC104581.2-201ENST00000572227 430 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 MIR3169-201ENST00000578032 83 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 MIR8076-201ENST00000611401 83 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 SCARNA15.3-201ENST00000626315 122 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 SCARNA4.1-201ENST00000628597 123 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms