Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-622P-201ENST00000384272 103 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 MIR23B-201ENST00000384832 97 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 MIR186-201ENST00000384988 86 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 RNU5E-9P-201ENST00000411164 104 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 ELOCP21-201ENST00000412558 336 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 AL451074.5-201ENST00000415894 435 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 BTF3P11-201ENST00000426582 477 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 SNRPGP5-201ENST00000456003 220 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 RNA5SP310-201ENST00000459084 116 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 AC006445.2-201ENST00000510061 472 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 AP005660.1-201ENST00000522972 293 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 SNORA71.3-201ENST00000362582 128 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 SNORA31-201ENST00000362607 130 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-653P-201ENST00000363074 106 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 RNA5SP42-201ENST00000364278 115 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 RNA5SP171-201ENST00000391071 115 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 SNORA26.3-201ENST00000391119 136 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 MIR208B-201ENST00000401172 77 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-1199P-201ENST00000411249 104 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 AC084357.1-201ENST00000473404 255 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 PHBP14-201ENST00000512887 367 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 AP004242.1-201ENST00000533701 349 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 AP002001.1-203ENST00000534002 267 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 AC011602.1-201ENST00000546484 331 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 MIR92B-201ENST00000607575 96 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 AL008718.3-201ENST00000610217 321 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 AP003355.3-201ENST00000623465 114 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 MIR3199-2-201ENST00000636243 86 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 SNORD98-201ENST00000636377 67 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 AC009093.8-201ENST00000641769 292 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 AL133383.2-201ENST00000622958 2336 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 AC099654.7-201ENST00000635788 2127 ntBASIC3.16□□□□□ -1.9
SEC61A2Q9H9S3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
SEC61A2Q9H9S3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.15□□□□□ -1.9
SEC61A2Q9H9S3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.15□□□□□ -1.9
SEC61A2Q9H9S3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.15□□□□□ -1.9
SEC61A2Q9H9S3 Y_RNA.435-201ENST00000384095 112 ntBASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 AL357075.1-201ENST00000404107 726 ntBASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 RNA5SP390-201ENST00000410191 113 ntBASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 RN7SKP53-201ENST00000411337 315 ntBASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 RPS26P42-201ENST00000413485 326 ntBASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 snoU13.28-201ENST00000459235 104 ntBASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 RNU2-58P-201ENST00000516403 183 ntBASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 AL162713.1-201ENST00000604480 262 ntBASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 AL110115.1-201ENST00000614396 364 ntBASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SEC61A2Q9H9S3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 AC007496.3-201ENST00000624987 3443 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 AC058791.1-201ENST00000608412 3198 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 RNU5F-3P-201ENST00000363767 117 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 SNORD50.2-201ENST00000365465 70 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 Y_RNA.571-201ENST00000384753 98 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 MIR200C-201ENST00000384980 68 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U3.26-201ENST00000391236 204 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 RNU2-2P-201ENST00000410396 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 AC093578.1-201ENST00000415219 368 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 HMGN2P31-201ENST00000432430 273 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 AL161651.1-201ENST00000440882 223 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 AC103975.1-201ENST00000482506 483 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms