Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 AP001324.2-201ENST00000461163 319 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 RPL21P104-201ENST00000464143 478 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 SNORA70.19-201ENST00000516717 90 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 CYCSP23-201ENST00000519781 313 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 MIR5187-201ENST00000583479 76 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 AL078605.1-201ENST00000603529 500 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 AC073349.3-201ENST00000617616 186 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 U6.105-201ENST00000637379 88 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 AC007256.1-201ENST00000392253 2765 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 AP002088.1-201ENST00000382740 395 ntBASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 MIR34B-201ENST00000385076 84 ntBASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 TMSB4XP3-201ENST00000445144 114 ntBASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 UQCRBP2-201ENST00000447827 297 ntBASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 AC012308.1-201ENST00000451232 178 ntBASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 AC005042.3-201ENST00000453230 174 ntBASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 AC074133.1-201ENST00000515696 183 ntBASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 RNU5F-8P-201ENST00000515941 111 ntBASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 AC006199.1-201ENST00000548728 219 ntBASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 AP003355.3-201ENST00000623465 114 ntBASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
FOXP3Q9BZS1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
FOXP3Q9BZS1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.65□□□□□ -1.82
FOXP3Q9BZS1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
FOXP3Q9BZS1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
FOXP3Q9BZS1 Y_RNA.217-201ENST00000364214 105 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 RNA5SP51-201ENST00000364750 119 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 Y_RNA.435-201ENST00000384095 112 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 MIR183-201ENST00000384958 110 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 RN7SKP51-201ENST00000410781 304 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 RPS4XP2-201ENST00000458402 793 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 Y_RNA.641-201ENST00000459414 105 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 AC007215.1-201ENST00000464893 276 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 RN7SL293P-201ENST00000481765 281 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 AC106707.2-201ENST00000484182 374 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 RN7SKP18-201ENST00000516005 275 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 ACA59.2-201ENST00000517061 156 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 AC055872.1-201ENST00000570978 278 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 SNORA50A-202ENST00000629536 136 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 RBBP8P1-201ENST00000449447 1844 ntBASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
FOXP3Q9BZS1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 RPL30P12-201ENST00000474666 353 ntBASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 SNORA31.16-201ENST00000516773 139 ntBASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 SNORA70.24-201ENST00000517233 118 ntBASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 AC093331.1-201ENST00000521474 169 ntBASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 MTND5P35-201ENST00000557537 1720 ntBASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 AL136164.4-201ENST00000625013 2135 ntBASIC3.64□□□□□ -1.83
FOXP3Q9BZS1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
FOXP3Q9BZS1 CUL1P1-201ENST00000509510 2425 ntBASIC3.63□□□□□ -1.83
FOXP3Q9BZS1 BX322639.1-202ENST00000423987 2213 ntBASIC3.63□□□□□ -1.83
FOXP3Q9BZS1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
FOXP3Q9BZS1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXP3Q9BZS1 RNA5SP72-201ENST00000364442 117 ntBASIC3.63□□□□□ -1.83
FOXP3Q9BZS1 RNA5SP240-201ENST00000365355 128 ntBASIC3.63□□□□□ -1.83
FOXP3Q9BZS1 SNORA9-201ENST00000384215 133 ntBASIC3.63□□□□□ -1.83
FOXP3Q9BZS1 MIR491-201ENST00000384877 84 ntBASIC3.63□□□□□ -1.83
FOXP3Q9BZS1 MIR218-2-201ENST00000385006 110 ntBASIC3.63□□□□□ -1.83
FOXP3Q9BZS1 MIR483-201ENST00000385070 76 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms