Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM47Q96LD4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM47Q96LD4 Y_RNA.549-201ENST00000384657 102 ntBASIC4.64□□□□□ -1.67
TRIM47Q96LD4 RNA5SP104-201ENST00000410989 118 ntBASIC4.64□□□□□ -1.67
TRIM47Q96LD4 Z92545.1-201ENST00000411782 234 ntBASIC4.64□□□□□ -1.67
TRIM47Q96LD4 AC069285.2-201ENST00000440210 275 ntBASIC4.64□□□□□ -1.67
TRIM47Q96LD4 AP000705.1-201ENST00000454567 350 ntBASIC4.64□□□□□ -1.67
TRIM47Q96LD4 SNRPGP7-201ENST00000469016 106 ntBASIC4.64□□□□□ -1.67
TRIM47Q96LD4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM47Q96LD4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.64□□□□□ -1.67
TRIM47Q96LD4 AC087499.8-201ENST00000578406 226 ntBASIC4.64□□□□□ -1.67
TRIM47Q96LD4 MIR5195-201ENST00000583555 115 ntBASIC4.64□□□□□ -1.67
TRIM47Q96LD4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM47Q96LD4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.64□□□□□ -1.67
TRIM47Q96LD4 MIR3202-2-201ENST00000635980 79 ntBASIC4.64□□□□□ -1.67
TRIM47Q96LD4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM47Q96LD4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM47Q96LD4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM47Q96LD4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM47Q96LD4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM47Q96LD4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM47Q96LD4 MAPK10-372ENST00000641954 3413 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 SNORD115-30-201ENST00000364117 82 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 RNU1-140P-201ENST00000365040 165 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 RNU6-1134P-201ENST00000365156 101 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 Y_RNA.341-201ENST00000365341 102 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 RNU6-1014P-201ENST00000383940 103 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 RPL39P34-201ENST00000477141 156 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 PPIAP15-201ENST00000479662 484 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 AC025445.1-201ENST00000502728 300 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 RNU6-109P-201ENST00000516364 107 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 RNU6-184P-201ENST00000516514 107 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 MIR4458-201ENST00000578872 75 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 AL356157.2-201ENST00000605122 111 ntBASIC4.63□□□□□ -1.67
TRIM47Q96LD4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM47Q96LD4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 AL359693.1-201ENST00000614959 2407 ntBASIC4.62□□□□□ -1.67
TRIM47Q96LD4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 RNU6-978P-201ENST00000364371 103 ntBASIC4.62□□□□□ -1.67
TRIM47Q96LD4 RNU6-144P-201ENST00000383951 107 ntBASIC4.62□□□□□ -1.67
TRIM47Q96LD4 Y_RNA.466-201ENST00000384294 113 ntBASIC4.62□□□□□ -1.67
TRIM47Q96LD4 MIR549A-201ENST00000385268 96 ntBASIC4.62□□□□□ -1.67
TRIM47Q96LD4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 RPS29P4-201ENST00000414733 161 ntBASIC4.62□□□□□ -1.67
TRIM47Q96LD4 SNRPGP8-201ENST00000454064 226 ntBASIC4.62□□□□□ -1.67
TRIM47Q96LD4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 SNORD115-40-201ENST00000606510 82 ntBASIC4.62□□□□□ -1.67
TRIM47Q96LD4 U3.45-201ENST00000607547 219 ntBASIC4.62□□□□□ -1.67
TRIM47Q96LD4 MALAT1.1-201ENST00000618249 95 ntBASIC4.62□□□□□ -1.67
TRIM47Q96LD4 AL590808.1-201ENST00000618696 141 ntBASIC4.62□□□□□ -1.67
TRIM47Q96LD4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM47Q96LD4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 Y_RNA.310-201ENST00000365063 113 ntBASIC4.61□□□□□ -1.67
TRIM47Q96LD4 Y_RNA.456-201ENST00000384232 111 ntBASIC4.61□□□□□ -1.67
TRIM47Q96LD4 MIR514A1-201ENST00000385133 98 ntBASIC4.61□□□□□ -1.67
TRIM47Q96LD4 MIR1250-201ENST00000408098 113 ntBASIC4.61□□□□□ -1.67
TRIM47Q96LD4 MIR1263-201ENST00000408324 86 ntBASIC4.61□□□□□ -1.67
TRIM47Q96LD4 SNORA3.3-201ENST00000408712 125 ntBASIC4.61□□□□□ -1.67
TRIM47Q96LD4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 AC006026.2-201ENST00000457376 180 ntBASIC4.61□□□□□ -1.67
TRIM47Q96LD4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 RNA5SP290-201ENST00000517133 127 ntBASIC4.61□□□□□ -1.67
TRIM47Q96LD4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 MIR6715B-201ENST00000637172 77 ntBASIC4.61□□□□□ -1.67
TRIM47Q96LD4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM47Q96LD4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM47Q96LD4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM47Q96LD4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM47Q96LD4 RNU6-1264P-201ENST00000383891 107 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms