Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 MIR3128-201ENST00000581957 66 ntBASIC3.6□□□□□ -1.83
SHDQ96IW2 RPL30P11-203ENST00000598995 310 ntBASIC3.6□□□□□ -1.83
SHDQ96IW2 AC037487.3-201ENST00000606668 112 ntBASIC3.6□□□□□ -1.83
SHDQ96IW2 AL162274.2-201ENST00000614406 332 ntBASIC3.6□□□□□ -1.83
SHDQ96IW2 AP001282.2-201ENST00000616149 309 ntBASIC3.6□□□□□ -1.83
SHDQ96IW2 U4.6-201ENST00000621618 127 ntBASIC3.6□□□□□ -1.83
SHDQ96IW2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.6□□□□□ -1.83
SHDQ96IW2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHDQ96IW2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.6□□□□□ -1.83
SHDQ96IW2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SHDQ96IW2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.59□□□□□ -1.83
SHDQ96IW2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SHDQ96IW2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHDQ96IW2 Y_RNA.237-201ENST00000364439 102 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 SNORA72.2-201ENST00000365028 127 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 SNORA46.1-201ENST00000391069 153 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 SNORA53-201ENST00000391141 249 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.59□□□□□ -1.83
SHDQ96IW2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.59□□□□□ -1.83
SHDQ96IW2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.59□□□□□ -1.83
SHDQ96IW2 RNU6-625P-201ENST00000459412 107 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 S100A11P2-201ENST00000467589 312 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 RPL31P41-201ENST00000477967 372 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 SEM1P1-201ENST00000506694 209 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 RNU6-496P-201ENST00000516145 99 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 RNU6-1338P-201ENST00000516328 91 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 DEFB108E-201ENST00000524692 240 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 MIR5004-201ENST00000579078 107 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.59□□□□□ -1.83
SHDQ96IW2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.59□□□□□ -1.83
SHDQ96IW2 AC005176.2-201ENST00000596933 147 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 RPL17P51-201ENST00000605218 238 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 TCL6_2.1-201ENST00000615162 119 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 AC018692.3-201ENST00000623929 123 ntBASIC3.59□□□□□ -1.83
SHDQ96IW2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHDQ96IW2 AL035425.3-201ENST00000564206 4996 ntBASIC3.59□□□□□ -1.84
SHDQ96IW2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SHDQ96IW2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.58□□□□□ -1.84
SHDQ96IW2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.58□□□□□ -1.84
SHDQ96IW2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHDQ96IW2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.58□□□□□ -1.84
SHDQ96IW2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.58□□□□□ -1.84
SHDQ96IW2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHDQ96IW2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SHDQ96IW2 RNU6-290P-201ENST00000365212 101 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 RNU6-20P-201ENST00000384106 107 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 Y_RNA.498-201ENST00000384460 102 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 MIR549A-201ENST00000385268 96 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.58□□□□□ -1.84
SHDQ96IW2 DBIP2-201ENST00000419076 262 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 AC027124.2-201ENST00000428249 105 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.58□□□□□ -1.84
SHDQ96IW2 IFNA11P-201ENST00000446352 526 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 RN7SL330P-201ENST00000469709 307 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 AC091179.3-201ENST00000474761 144 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.58□□□□□ -1.84
SHDQ96IW2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.58□□□□□ -1.84
SHDQ96IW2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.58□□□□□ -1.84
SHDQ96IW2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 SCARNA17.2-201ENST00000516334 143 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 HSPE1P18-201ENST00000517602 280 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 AC012433.1-201ENST00000588916 398 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 MZT1P2-201ENST00000604387 248 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 BRDTP1-201ENST00000605735 677 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 SCARNA17.4-201ENST00000614296 143 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 AC002064.3-201ENST00000623448 346 ntBASIC3.58□□□□□ -1.84
SHDQ96IW2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHDQ96IW2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.58□□□□□ -1.84
SHDQ96IW2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHDQ96IW2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHDQ96IW2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHDQ96IW2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SHDQ96IW2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHDQ96IW2 Y_RNA.352-201ENST00000365439 102 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 RNU6-1310P-201ENST00000384153 107 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 Y_RNA.477-201ENST00000384352 108 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 Y_RNA.515-201ENST00000384535 112 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 MIR1289-1-201ENST00000408836 144 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.57□□□□□ -1.84
SHDQ96IW2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.57□□□□□ -1.84
SHDQ96IW2 MTND4LP30-201ENST00000454092 297 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 RN7SL504P-201ENST00000494496 287 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 RNU6-579P-201ENST00000516879 102 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 RN7SKP209-201ENST00000516888 304 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 IGKV2-26-201ENST00000518305 343 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.57□□□□□ -1.84
SHDQ96IW2 EIF4BP1-201ENST00000554881 351 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 MIR4423-201ENST00000580922 80 ntBASIC3.57□□□□□ -1.84
SHDQ96IW2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.57□□□□□ -1.84
SHDQ96IW2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHDQ96IW2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.57□□□□□ -1.84
SHDQ96IW2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SHDQ96IW2 Y_RNA.60-201ENST00000362831 98 ntBASIC3.56□□□□□ -1.84
SHDQ96IW2 RNA5SP374-201ENST00000362939 125 ntBASIC3.56□□□□□ -1.84
SHDQ96IW2 RNA5SP322-201ENST00000363617 119 ntBASIC3.56□□□□□ -1.84
SHDQ96IW2 RNU6-961P-201ENST00000363893 105 ntBASIC3.56□□□□□ -1.84
SHDQ96IW2 Y_RNA.416-201ENST00000384014 113 ntBASIC3.56□□□□□ -1.84
SHDQ96IW2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms