Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC136601.2-201ENST00000604356 474 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 AC091167.4-201ENST00000605079 184 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 AL359198.2-201ENST00000611836 194 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 AC012640.5-201ENST00000623897 319 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM11Q96F44 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM11Q96F44 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM11Q96F44 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM11Q96F44 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
TRIM11Q96F44 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM11Q96F44 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM11Q96F44 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM11Q96F44 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM11Q96F44 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM11Q96F44 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TRIM11Q96F44 MIR450A1-201ENST00000362262 91 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 RNA5SP322-201ENST00000363617 119 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 RNU6-1205P-201ENST00000363625 106 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 U3.9-201ENST00000363823 204 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 Y_RNA.229-201ENST00000364347 113 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 MIR199A2-201ENST00000385289 110 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 MIR548A3-201ENST00000385297 97 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 SNORA26.3-201ENST00000391119 136 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 RPS26P8-201ENST00000393490 348 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 RNU4-43P-201ENST00000410628 137 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 AL590383.1-201ENST00000428602 75 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 AL158147.1-201ENST00000443970 75 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 RN7SL330P-201ENST00000469709 307 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 SNORA31.9-201ENST00000516429 84 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 Y_RNA.692-201ENST00000516627 105 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM11Q96F44 AC006199.1-201ENST00000548728 219 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 AC133485.4-201ENST00000561835 220 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 AC138907.4-201ENST00000570107 226 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM11Q96F44 AC020895.1-201ENST00000595362 272 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM11Q96F44 MIR6716-201ENST00000613413 80 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM11Q96F44 MIR492-201ENST00000638676 116 ntBASIC4.13□□□□□ -1.75
TRIM11Q96F44 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM11Q96F44 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM11Q96F44 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM11Q96F44 AL136164.4-201ENST00000625013 2135 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM11Q96F44 RNU6-799P-201ENST00000363567 107 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 RNU6-727P-201ENST00000363592 107 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 RNU6-454P-201ENST00000364292 107 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 RNU6-597P-201ENST00000365620 102 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 HMGN2P8-201ENST00000391458 268 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 RPL21P17-201ENST00000397467 475 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 ARF4P2-201ENST00000430209 526 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 AC244670.1-201ENST00000436879 112 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM11Q96F44 CR383656.8-201ENST00000549046 145 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM11Q96F44 MIR5047-201ENST00000579212 100 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 AC053481.4-201ENST00000583164 216 ntBASIC4.12□□□□□ -1.75
TRIM11Q96F44 AC118273.1-201ENST00000525324 3006 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TRIM11Q96F44 RNA5SP443-201ENST00000363083 132 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 RNA5SP97-201ENST00000365006 84 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 Y_RNA.368-201ENST00000365547 113 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 SNORA12.1-201ENST00000390873 148 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 AL031003.1-201ENST00000404229 172 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 Y_RNA.630-201ENST00000411370 108 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM11Q96F44 AC010618.1-201ENST00000469924 477 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 RNA5SP143-201ENST00000516936 115 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM11Q96F44 MED28P6-201ENST00000558776 231 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 MIR3186-201ENST00000577404 85 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM11Q96F44 U6.98-201ENST00000637157 84 ntBASIC4.11□□□□□ -1.75
TRIM11Q96F44 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM11Q96F44 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM11Q96F44 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TRIM11Q96F44 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM11Q96F44 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM11Q96F44 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM11Q96F44 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM11Q96F44 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
TRIM11Q96F44 SNORD115-30-201ENST00000364117 82 ntBASIC4.1□□□□□ -1.75
TRIM11Q96F44 RNU6-1082P-201ENST00000364574 107 ntBASIC4.1□□□□□ -1.75
TRIM11Q96F44 AC068538.1-201ENST00000376856 336 ntBASIC4.1□□□□□ -1.75
TRIM11Q96F44 RNU6-880P-201ENST00000384526 107 ntBASIC4.1□□□□□ -1.75
TRIM11Q96F44 SNORA70C-201ENST00000384538 135 ntBASIC4.1□□□□□ -1.75
TRIM11Q96F44 MIR320B2-201ENST00000408479 138 ntBASIC4.1□□□□□ -1.75
TRIM11Q96F44 RHEBP3-201ENST00000411920 351 ntBASIC4.1□□□□□ -1.75
TRIM11Q96F44 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM11Q96F44 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM11Q96F44 AL356095.1-201ENST00000417217 199 ntBASIC4.1□□□□□ -1.75
TRIM11Q96F44 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM11Q96F44 RNU6-1061P-201ENST00000516530 99 ntBASIC4.1□□□□□ -1.75
TRIM11Q96F44 RNU2-60P-201ENST00000517290 128 ntBASIC4.1□□□□□ -1.75
TRIM11Q96F44 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM11Q96F44 MIR4724-201ENST00000579485 89 ntBASIC4.1□□□□□ -1.75
TRIM11Q96F44 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM11Q96F44 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TRIM11Q96F44 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms