Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 U3.19-201ENST00000390893 196 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 RNU6-1197P-201ENST00000391183 107 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VRK3Q8IV63 UBA52P6-201ENST00000399822 382 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 RNU2-37P-201ENST00000410695 177 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 RN7SKP51-201ENST00000410781 304 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 AC074117.2-201ENST00000417130 397 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 AC245291.1-201ENST00000419501 328 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 AC006028.1-201ENST00000438379 402 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.06□□□□□ -1.92
VRK3Q8IV63 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.06□□□□□ -1.92
VRK3Q8IV63 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.06□□□□□ -1.92
VRK3Q8IV63 RN7SL807P-201ENST00000470923 297 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 AC091959.1-201ENST00000495857 238 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VRK3Q8IV63 RNA5SP217-201ENST00000515959 91 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 RNU6-1278P-201ENST00000516130 107 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 RNU7-110P-201ENST00000516891 62 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 RNU6-58P-201ENST00000517143 103 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 RNA5SP380-201ENST00000517190 98 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 AL391261.3-201ENST00000557194 520 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 H3F3AP1-201ENST00000559984 334 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.06□□□□□ -1.92
VRK3Q8IV63 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.06□□□□□ -1.92
VRK3Q8IV63 AC037487.3-201ENST00000606668 112 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 AC024581.2-201ENST00000619986 252 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
VRK3Q8IV63 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
VRK3Q8IV63 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VRK3Q8IV63 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.05□□□□□ -1.92
VRK3Q8IV63 RNU6-961P-201ENST00000363893 105 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 Y_RNA.319-201ENST00000365138 92 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 Y_RNA.333-201ENST00000365274 102 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 RNU6-81P-201ENST00000365608 104 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 RNU6-898P-201ENST00000365627 104 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 RNU1-73P-201ENST00000383971 164 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 RNU6-21P-201ENST00000384710 107 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 MIR325-201ENST00000385260 98 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 SNORD67-201ENST00000390833 111 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 Y_RNA.590-201ENST00000410140 107 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 RNA5SP293-201ENST00000410527 113 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 RNU6-1001P-201ENST00000411265 100 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 RPL19P1-201ENST00000411635 428 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 RPL26P27-201ENST00000414397 437 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.05□□□□□ -1.92
VRK3Q8IV63 AL358075.3-201ENST00000426289 226 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 SETP5-201ENST00000437270 562 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.05□□□□□ -1.92
VRK3Q8IV63 RPS12P18-201ENST00000442381 270 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.05□□□□□ -1.92
VRK3Q8IV63 AC006445.1-201ENST00000491925 405 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 Y_RNA.662-201ENST00000516028 97 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 RNU6-1198P-201ENST00000516904 67 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 RNU6-1073P-201ENST00000517182 106 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.05□□□□□ -1.92
VRK3Q8IV63 MRPS18CP4-201ENST00000535821 231 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.05□□□□□ -1.92
VRK3Q8IV63 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.05□□□□□ -1.92
VRK3Q8IV63 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.05□□□□□ -1.92
VRK3Q8IV63 MIR5004-201ENST00000579078 107 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 AC008749.1-201ENST00000597650 306 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 MIR3651-201ENST00000630427 90 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.05□□□□□ -1.92
VRK3Q8IV63 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
VRK3Q8IV63 AL109809.4-201ENST00000603520 2185 ntBASIC3.05□□□□□ -1.92
VRK3Q8IV63 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VRK3Q8IV63 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VRK3Q8IV63 AC090740.1-201ENST00000623193 2262 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VRK3Q8IV63 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VRK3Q8IV63 SNORA25.1-201ENST00000362326 128 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 RNU6-858P-201ENST00000362436 107 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 RNA5SP374-201ENST00000362939 125 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 RNU1-100P-201ENST00000365255 165 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 Y_RNA.383-201ENST00000383855 97 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 RNU6-658P-201ENST00000384606 106 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 RN7SKP61-201ENST00000410642 295 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 RNU6-1245P-201ENST00000411130 106 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.04□□□□□ -1.92
VRK3Q8IV63 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.04□□□□□ -1.92
VRK3Q8IV63 WARS2P1-201ENST00000429678 537 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 AL512844.2-201ENST00000433990 593 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.04□□□□□ -1.92
VRK3Q8IV63 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.04□□□□□ -1.92
VRK3Q8IV63 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.04□□□□□ -1.92
VRK3Q8IV63 AP001025.1-201ENST00000486139 332 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 SNORA40.9-201ENST00000515895 93 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VRK3Q8IV63 UBL5P4-201ENST00000562584 236 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 MIR3144-201ENST00000579460 79 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.04□□□□□ -1.92
VRK3Q8IV63 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.04□□□□□ -1.92
VRK3Q8IV63 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
VRK3Q8IV63 HAUS6P2-201ENST00000433254 2404 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 AL079305.1-201ENST00000623159 3008 ntBASIC3.04□□□□□ -1.92
VRK3Q8IV63 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VRK3Q8IV63 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.03□□□□□ -1.92
VRK3Q8IV63 RNA5SP383-201ENST00000362934 120 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 SNORA38.1-201ENST00000364172 131 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms