Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 SNORD9-201ENST00000362566 104 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 RNA5SP361-201ENST00000362686 118 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 Y_RNA.158-201ENST00000363651 101 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.54□□□□□ -2
TMEM88Q6PEY1 Y_RNA.424-201ENST00000384063 103 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 AL590004.2-201ENST00000404787 371 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.54□□□□□ -2
TMEM88Q6PEY1 EIF1P2-201ENST00000428233 350 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.54□□□□□ -2
TMEM88Q6PEY1 AL161788.1-201ENST00000441805 169 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 RPS3AP12-201ENST00000443616 753 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 PRSS3P4-201ENST00000453323 162 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 MTCO3P8-201ENST00000453691 755 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 RNU6-1198P-201ENST00000516904 67 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 RNA5SP54-201ENST00000516951 92 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.54□□□□□ -2
TMEM88Q6PEY1 DEFB131C-201ENST00000528817 165 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 CBX3P7-201ENST00000532876 502 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 GNAI2P1-201ENST00000541815 315 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 AC093023.1-201ENST00000547375 507 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.54□□□□□ -2
TMEM88Q6PEY1 AC084757.4-201ENST00000616350 526 ntBASIC2.54□□□□□ -2
TMEM88Q6PEY1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TMEM88Q6PEY1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.54□□□□□ -2
TMEM88Q6PEY1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.54□□□□□ -2
TMEM88Q6PEY1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.54□□□□□ -2
TMEM88Q6PEY1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMEM88Q6PEY1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
TMEM88Q6PEY1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TMEM88Q6PEY1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TMEM88Q6PEY1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMEM88Q6PEY1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TMEM88Q6PEY1 RNU1-23P-201ENST00000363361 144 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 SNORD115-8-201ENST00000363856 82 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 SNORD115-38-201ENST00000365037 82 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 SNORD14.1-201ENST00000365609 90 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 Y_RNA.422-201ENST00000384054 114 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 SNORA51.11-201ENST00000384442 131 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 RNU6-1160P-201ENST00000384546 104 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 RNU1-139P-201ENST00000391307 165 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 MTND2P23-201ENST00000422990 651 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.53□□□□□ -2
TMEM88Q6PEY1 AC096638.1-201ENST00000444678 216 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 AC112492.4-201ENST00000456549 352 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 AC007215.1-201ENST00000464893 276 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 RPL7P49-201ENST00000471402 708 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 RPS29P2-201ENST00000479278 136 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.53□□□□□ -2
TMEM88Q6PEY1 RNU6-826P-201ENST00000516827 104 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.53□□□□□ -2
TMEM88Q6PEY1 MIR3944-201ENST00000581277 108 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.53□□□□□ -2
TMEM88Q6PEY1 AC125232.2-201ENST00000592457 143 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 AL355297.2-201ENST00000604792 129 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 MIR7851-201ENST00000610611 160 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 AC008121.3-201ENST00000618726 433 ntBASIC2.53□□□□□ -2
TMEM88Q6PEY1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMEM88Q6PEY1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TMEM88Q6PEY1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 RNU6-727P-201ENST00000363592 107 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 SNORD32B-201ENST00000364460 84 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 SNORA63C-201ENST00000364578 129 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 RNU6-926P-201ENST00000384075 107 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 RNU6-281P-201ENST00000384212 103 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 RNA5SP213-201ENST00000391031 106 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 RNU6-1001P-201ENST00000411265 100 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 AC004386.2-201ENST00000441858 148 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 AC010095.1-201ENST00000443543 144 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 RNU6-327P-201ENST00000516270 127 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 SNORA40.14-201ENST00000516543 86 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 SNORA70.18-201ENST00000516696 98 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 AC091144.1-201ENST00000519573 138 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 AC040926.1-201ENST00000530195 238 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 MIR5006-201ENST00000583027 110 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 MIR3922-201ENST00000585192 84 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 AC124312.5-201ENST00000604451 268 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 AC005562.2-201ENST00000618264 111 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 AL138825.1-201ENST00000618587 192 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 BX322639.1-202ENST00000423987 2213 ntBASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.52□□□□□ -2.01
TMEM88Q6PEY1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 SNORA63.1-201ENST00000362493 131 ntBASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 RNU6-1301P-201ENST00000362724 104 ntBASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 RNU6-743P-201ENST00000364151 106 ntBASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 AC117470.1-201ENST00000381974 330 ntBASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 RNU6-318P-201ENST00000384283 103 ntBASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 RNU6-101P-201ENST00000410323 104 ntBASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 RNU2-63P-201ENST00000410792 194 ntBASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 AC004866.1-201ENST00000411748 78 ntBASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 AC112220.1-201ENST00000434628 355 ntBASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.51□□□□□ -2.01
TMEM88Q6PEY1 AC104389.3-201ENST00000445629 235 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms