Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 RNA5SP119-201ENST00000362715 117 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 RNU6-497P-201ENST00000365316 104 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 RNA5SP22-201ENST00000365393 109 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 SNORA9-201ENST00000384215 133 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 AC093578.1-201ENST00000415219 368 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 AC019205.3-201ENST00000424573 156 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 AL691449.1-201ENST00000426570 421 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 AL645939.1-201ENST00000453429 797 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 RNU1-104P-201ENST00000517280 175 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 AL356575.1-201ENST00000603008 283 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 AL021997.2-201ENST00000615674 271 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 Y_RNA.818-201ENST00000618813 71 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 U6.115-201ENST00000636045 103 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 MIR2052-201ENST00000636055 55 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 MARK2P15-201ENST00000432204 2186 ntBASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTC1Q2NKJ3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 AC118273.1-201ENST00000525324 3006 ntBASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 MIR208B-201ENST00000401172 77 ntBASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 RNU2-55P-201ENST00000411146 174 ntBASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 AC005300.1-201ENST00000428401 373 ntBASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 SNRPEP9-201ENST00000436794 238 ntBASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 AC141557.1-201ENST00000540982 400 ntBASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 MIR5685-201ENST00000579080 79 ntBASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 SNRPGP20-201ENST00000604477 205 ntBASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 AL137843.1-201ENST00000605078 385 ntBASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTC1Q2NKJ3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CTC1Q2NKJ3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 RNU6-788P-201ENST00000390967 104 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 SNORA26.3-201ENST00000391119 136 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 HLA-N-201ENST00000437516 135 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 RPL26P9-201ENST00000457466 433 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 RNU6-1299P-201ENST00000516316 100 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 RNU1-117P-201ENST00000517041 158 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 RNU6-158P-201ENST00000517104 100 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 AL049861.1-201ENST00000603130 150 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 AL162713.1-201ENST00000604480 262 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 AL138880.2-201ENST00000616214 239 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 MIR3529-201ENST00000637713 78 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 AC016588.2-201ENST00000632484 3021 ntBASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTC1Q2NKJ3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 AC011266.1-201ENST00000624119 3569 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 SNORA73.2-201ENST00000364946 201 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 MIR7-3-201ENST00000384898 110 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 MIR513A2-201ENST00000385249 127 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 SNORA11.2-201ENST00000408318 127 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 RNA5SP39-201ENST00000411245 120 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 AC002075.2-201ENST00000425207 252 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 AC078918.1-201ENST00000498515 228 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 AC025445.1-201ENST00000502728 300 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 MRPS36P2-201ENST00000512569 299 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 SNORA18.4-201ENST00000516440 124 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 Vault.1-201ENST00000516474 102 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 RNU6-365P-201ENST00000517113 106 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 AC091178.1-203ENST00000584586 279 ntBASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.51□□□□□ -1.69
CTC1Q2NKJ3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms