Protein–RNA interactions for Protein: Q16825

PTPN21, Tyrosine-protein phosphatase non-receptor type 21, humanhuman

Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21Q16825 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN21Q16825 AC140059.1-201ENST00000489238 361 ntBASIC3.18□□□□□ -1.9
PTPN21Q16825 Y_RNA.706-201ENST00000516933 99 ntBASIC3.18□□□□□ -1.9
PTPN21Q16825 RNU7-4P-201ENST00000516961 62 ntBASIC3.18□□□□□ -1.9
PTPN21Q16825 SNORD116.3-201ENST00000517176 78 ntBASIC3.18□□□□□ -1.9
PTPN21Q16825 AL442663.2-201ENST00000554385 511 ntBASIC3.18□□□□□ -1.9
PTPN21Q16825 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN21Q16825 AC091925.1-201ENST00000623204 462 ntBASIC3.18□□□□□ -1.9
PTPN21Q16825 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN21Q16825 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.17□□□□□ -1.9
PTPN21Q16825 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN21Q16825 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPN21Q16825 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN21Q16825 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN21Q16825 RNU4-15P-201ENST00000362613 141 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 SET-203ENST00000372688 801 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN21Q16825 MIR29B2-201ENST00000385055 81 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 RNA5SP201-201ENST00000410316 124 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 BMS1P22-201ENST00000414726 313 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 AC063976.3-201ENST00000426849 329 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 MTCO3P29-201ENST00000432119 779 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 AL035666.1-201ENST00000446195 348 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 AP000705.1-201ENST00000454567 350 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN21Q16825 UBL5P3-201ENST00000475112 231 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 AC020661.2-201ENST00000560114 134 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPN21Q16825 AL356280.1-201ENST00000603614 379 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN21Q16825 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN21Q16825 AC069528.2-201ENST00000624849 1991 ntBASIC3.17□□□□□ -1.9
PTPN21Q16825 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN21Q16825 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN21Q16825 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTPN21Q16825 RNU1-115P-201ENST00000365329 160 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 MIR32-201ENST00000384965 70 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 MIR190B-201ENST00000401119 79 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN21Q16825 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN21Q16825 AL590556.1-201ENST00000423231 483 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN21Q16825 AC104332.2-201ENST00000429959 156 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 UBBP3-201ENST00000445497 241 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 Y_RNA.638-201ENST00000459374 113 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 AC090096.1-201ENST00000489168 390 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 RNU6-1198P-201ENST00000516904 67 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN21Q16825 AL713866.2-201ENST00000603579 219 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN21Q16825 AL355596.1-201ENST00000565399 3996 ntBASIC3.16□□□□□ -1.9
PTPN21Q16825 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN21Q16825 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PTPN21Q16825 snoU2_19.1-201ENST00000362361 80 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 RNU6-137P-201ENST00000363680 108 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 RNU6-1180P-201ENST00000364935 107 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 U8.10-201ENST00000384260 133 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 MIR208B-201ENST00000401172 77 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 RN7SKP123-201ENST00000410732 291 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN21Q16825 MRPS18CP6-201ENST00000423587 223 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 AC092423.1-201ENST00000430165 186 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.15□□□□□ -1.91
PTPN21Q16825 snoU13.6-201ENST00000458785 104 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 AC003982.1-202ENST00000469928 248 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 AC103975.1-201ENST00000482506 483 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 Y_RNA.661-201ENST00000516003 99 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.15□□□□□ -1.91
PTPN21Q16825 AC023442.1-201ENST00000531247 422 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN21Q16825 MIR3117-201ENST00000584034 78 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 MIR3171-201ENST00000584270 74 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 AL138963.2-201ENST00000605137 226 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 AL355802.3-201ENST00000607571 545 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 PCGEM1.1-201ENST00000613431 131 ntBASIC3.15□□□□□ -1.91
PTPN21Q16825 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPN21Q16825 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PTPN21Q16825 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PTPN21Q16825 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.14□□□□□ -1.91
PTPN21Q16825 SNORD115-8-201ENST00000363856 82 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 SNORD115-38-201ENST00000365037 82 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 Y_RNA.496-201ENST00000384444 101 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 RNU6-220P-201ENST00000390919 107 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 HMGB3P2-201ENST00000411913 584 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 PMCHL1-202ENST00000423102 261 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.14□□□□□ -1.91
PTPN21Q16825 AC145146.1-201ENST00000496370 254 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 AC105758.1-201ENST00000506038 399 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN21Q16825 Y_RNA.711-201ENST00000516993 102 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 AC144568.1-201ENST00000520139 137 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN21Q16825 MIR1244-1-201ENST00000612829 85 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 MIR5739-201ENST00000619803 80 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 MIR1244-3-201ENST00000635744 85 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 MIR1244-2-201ENST00000636449 85 ntBASIC3.14□□□□□ -1.91
PTPN21Q16825 MIR1244-4-202ENST00000636813 85 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms