Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC245060.5-201ENST00000610778 3293 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.43□□□□□ -2.18
CCNA1P78396 MIR96-201ENST00000362288 78 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 RNU6-181P-201ENST00000363225 107 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 RNU6-1285P-201ENST00000363480 105 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 RNU6-271P-201ENST00000363858 105 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 RNU4-91P-201ENST00000364778 135 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 RNU4-48P-201ENST00000365559 182 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 Y_RNA.466-201ENST00000384294 113 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 RNU6-360P-201ENST00000390944 104 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 RPL21P111-201ENST00000418453 477 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.43□□□□□ -2.18
CCNA1P78396 AC092447.3-201ENST00000426027 686 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.43□□□□□ -2.18
CCNA1P78396 AL031667.1-201ENST00000440222 725 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 KATNBL1P3-201ENST00000443475 909 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 RPS27AP8-201ENST00000452665 445 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.43□□□□□ -2.18
CCNA1P78396 RPL31P3-201ENST00000458430 332 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 MTCO2P6-201ENST00000463134 685 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 RPL9P9-202ENST00000466501 579 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 RPS26P55-201ENST00000471178 356 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 AC145146.1-201ENST00000496370 254 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 RNU6-445P-201ENST00000516949 107 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 AP002963.1-201ENST00000530590 184 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 AC011604.1-201ENST00000545978 196 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.43□□□□□ -2.18
CCNA1P78396 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 SUB1P2-201ENST00000556401 297 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 MIR5094-201ENST00000578766 85 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 AC040904.1-201ENST00000590850 223 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 AL590229.1-201ENST00000603497 542 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 AC080078.3-201ENST00000605407 463 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 AP000770.2-201ENST00000623694 100 ntBASIC1.43□□□□□ -2.18
CCNA1P78396 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.43□□□□□ -2.18
CCNA1P78396 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.42□□□□□ -2.18
CCNA1P78396 RNU6-428P-201ENST00000362942 107 ntBASIC1.42□□□□□ -2.18
CCNA1P78396 RNU6-438P-201ENST00000365561 103 ntBASIC1.42□□□□□ -2.18
CCNA1P78396 MTCO3P41-201ENST00000414801 328 ntBASIC1.42□□□□□ -2.18
CCNA1P78396 AC139712.2-201ENST00000424302 339 ntBASIC1.42□□□□□ -2.18
CCNA1P78396 C1DP4-201ENST00000455429 424 ntBASIC1.42□□□□□ -2.18
CCNA1P78396 AC097473.1-201ENST00000508142 408 ntBASIC1.42□□□□□ -2.18
CCNA1P78396 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.42□□□□□ -2.18
CCNA1P78396 HMGB1P33-201ENST00000563485 527 ntBASIC1.42□□□□□ -2.18
CCNA1P78396 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.42□□□□□ -2.18
CCNA1P78396 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.42□□□□□ -2.18
CCNA1P78396 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.42□□□□□ -2.18
CCNA1P78396 NIFKP6-201ENST00000598115 845 ntBASIC1.42□□□□□ -2.18
CCNA1P78396 AC107304.1-201ENST00000604229 296 ntBASIC1.42□□□□□ -2.18
CCNA1P78396 RMST_2.1-201ENST00000617263 136 ntBASIC1.42□□□□□ -2.18
CCNA1P78396 ICE2P2-201ENST00000483823 2787 ntBASIC1.42□□□□□ -2.18
CCNA1P78396 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 RNU1-93P-201ENST00000364704 169 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 RNU6-336P-201ENST00000364891 107 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 MIR520A-201ENST00000384862 85 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 SNORA16.2-201ENST00000390991 127 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 SNORD70.1-201ENST00000391007 85 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 SNORA12-201ENST00000391162 147 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 MTCO2P34-201ENST00000421994 607 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CCNA1P78396 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.41□□□□□ -2.18
CCNA1P78396 VN1R108P-201ENST00000431580 830 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 PRPS1P1-201ENST00000445305 876 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 MTND1P18-201ENST00000448191 573 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.41□□□□□ -2.18
CCNA1P78396 AC022364.2-201ENST00000457963 554 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 RPL26P26-201ENST00000480251 434 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 MTCO3P7-201ENST00000510008 774 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 RNA5SP61-201ENST00000516453 100 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 RNU6-430P-201ENST00000517078 107 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.41□□□□□ -2.18
CCNA1P78396 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.41□□□□□ -2.18
CCNA1P78396 AC023050.3-201ENST00000541142 333 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 SNORA77B-201ENST00000578179 125 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.41□□□□□ -2.18
CCNA1P78396 AC002044.1-201ENST00000606707 158 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 AL355802.3-201ENST00000607571 545 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 AC073114.1-201ENST00000612027 490 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 MIR8063-201ENST00000621930 81 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 AC022418.1-201ENST00000624118 445 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 SNORD98-201ENST00000636377 67 ntBASIC1.41□□□□□ -2.18
CCNA1P78396 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.41□□□□□ -2.18
CCNA1P78396 AL390237.1-201ENST00000404226 1415 ntBASIC1.4□□□□□ -2.18
CCNA1P78396 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCNA1P78396 RNU4-15P-201ENST00000362613 141 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 RNU6-393P-201ENST00000384475 107 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 RNU6-692P-201ENST00000384496 107 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 RNU6-1127P-201ENST00000384580 107 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 RNU6-293P-201ENST00000411259 106 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 PIGFP2-201ENST00000421400 651 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 CST2P1-201ENST00000425770 87 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 MTND4P32-201ENST00000437189 1237 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 AC243964.1-201ENST00000441814 261 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 AL031274.1-201ENST00000450334 232 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.4□□□□□ -2.19
CCNA1P78396 RNU6-377P-201ENST00000515965 102 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 RNU2-69P-201ENST00000516061 100 ntBASIC1.4□□□□□ -2.19
CCNA1P78396 RNA5SP481-201ENST00000516814 122 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms