Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SNORA31.16-201ENST00000516773 139 ntBASIC3.86□□□□□ -1.79
CHMP4BP1P59074 RNU6-182P-201ENST00000516970 105 ntBASIC3.86□□□□□ -1.79
CHMP4BP1P59074 MIR4276-201ENST00000584832 70 ntBASIC3.86□□□□□ -1.79
CHMP4BP1P59074 AC005296.1-201ENST00000616145 209 ntBASIC3.86□□□□□ -1.79
CHMP4BP1P59074 AC022149.2-201ENST00000621061 203 ntBASIC3.86□□□□□ -1.79
CHMP4BP1P59074 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CHMP4BP1P59074 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHMP4BP1P59074 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CHMP4BP1P59074 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHMP4BP1P59074 Y_RNA.29-201ENST00000362570 113 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 Y_RNA.180-201ENST00000363867 113 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 Y_RNA.200-201ENST00000364018 102 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 RNU6-1141P-201ENST00000364520 107 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 Y_RNA.446-201ENST00000384178 104 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 RNU6-1145P-201ENST00000384246 107 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 RN7SKP61-201ENST00000410642 295 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 RNU6-1245P-201ENST00000411130 106 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 GPM6BP3-201ENST00000442797 145 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 AC012308.1-201ENST00000451232 178 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 SNORA59A-201ENST00000459326 152 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 AC073901.1-201ENST00000462471 408 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 AC093663.1-201ENST00000497190 394 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 RN7SKP49-201ENST00000516675 260 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 Y_RNA.700-201ENST00000516806 100 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 RN7SKP40-201ENST00000517211 242 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 AC011921.3-201ENST00000605540 361 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 MIR8057-201ENST00000620957 69 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 AC092628.2-201ENST00000622492 339 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 AC110079.1-202ENST00000635213 138 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 RBBP8P1-201ENST00000449447 1844 ntBASIC3.85□□□□□ -1.79
CHMP4BP1P59074 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHMP4BP1P59074 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHMP4BP1P59074 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHMP4BP1P59074 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHMP4BP1P59074 RNU4-90P-201ENST00000362773 141 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 Y_RNA.111-201ENST00000363248 100 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 RNA5SP197-201ENST00000363357 119 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 RNU6-487P-201ENST00000365430 104 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 SNORA48.5-201ENST00000391143 135 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 RNA5SP390-201ENST00000410191 113 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 AC006028.1-201ENST00000438379 402 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
CHMP4BP1P59074 AP001486.1-201ENST00000463339 476 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.84□□□□□ -1.79
CHMP4BP1P59074 AC107626.1-201ENST00000471084 183 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 FCF1P8-201ENST00000510322 597 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 SNORD116-28-201ENST00000516123 91 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 CKS1BP7-201ENST00000522230 235 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.84□□□□□ -1.79
CHMP4BP1P59074 MIR5680-201ENST00000577577 84 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 AC012493.2-201ENST00000595083 291 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 AL162274.2-201ENST00000614406 332 ntBASIC3.84□□□□□ -1.79
CHMP4BP1P59074 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CHMP4BP1P59074 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CHMP4BP1P59074 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CHMP4BP1P59074 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHMP4BP1P59074 RNU6-740P-201ENST00000364734 105 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 RNU6-886P-201ENST00000384319 105 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 Y_RNA.570-201ENST00000384750 101 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 SNORA26.3-201ENST00000391119 136 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 RNU6-493P-201ENST00000391321 108 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.83□□□□□ -1.8
CHMP4BP1P59074 AC138623.1-201ENST00000418060 216 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.83□□□□□ -1.8
CHMP4BP1P59074 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.83□□□□□ -1.8
CHMP4BP1P59074 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 CBX3P4-201ENST00000538909 354 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 AC016256.1-201ENST00000547971 354 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 AC090897.2-201ENST00000581715 130 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.83□□□□□ -1.8
CHMP4BP1P59074 AL356157.2-201ENST00000605122 111 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 AL359198.2-201ENST00000611836 194 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.83□□□□□ -1.8
CHMP4BP1P59074 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHMP4BP1P59074 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHMP4BP1P59074 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.82□□□□□ -1.8
CHMP4BP1P59074 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHMP4BP1P59074 RNA5SP374-201ENST00000362939 125 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 RNU6-626P-201ENST00000363354 107 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 RNU6-873P-201ENST00000363833 107 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 SNORD115-8-201ENST00000363856 82 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 SNORD115-38-201ENST00000365037 82 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 RNU6-20P-201ENST00000384106 107 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 RNU6-541P-201ENST00000384709 110 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 AL133475.1-201ENST00000404414 305 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 AC244670.1-201ENST00000436879 112 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.82□□□□□ -1.8
CHMP4BP1P59074 RPL39P29-201ENST00000447779 157 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 AL441985.1-201ENST00000457727 251 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 RNU6-91P-201ENST00000607774 107 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.82□□□□□ -1.8
CHMP4BP1P59074 SCARNA15.3-201ENST00000626315 122 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 SCARNA4.1-201ENST00000628597 123 ntBASIC3.82□□□□□ -1.8
CHMP4BP1P59074 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.82□□□□□ -1.8
CHMP4BP1P59074 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHMP4BP1P59074 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms