Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.14□□□□□ -1.91
WNT3AP56704 AL358075.3-201ENST00000426289 226 ntBASIC3.14□□□□□ -1.91
WNT3AP56704 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.14□□□□□ -1.91
WNT3AP56704 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.14□□□□□ -1.91
WNT3AP56704 RN7SL807P-201ENST00000470923 297 ntBASIC3.14□□□□□ -1.91
WNT3AP56704 RN7SL504P-201ENST00000494496 287 ntBASIC3.14□□□□□ -1.91
WNT3AP56704 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.14□□□□□ -1.91
WNT3AP56704 RNU6-1198P-201ENST00000516904 67 ntBASIC3.14□□□□□ -1.91
WNT3AP56704 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.14□□□□□ -1.91
WNT3AP56704 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.14□□□□□ -1.91
WNT3AP56704 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.14□□□□□ -1.91
WNT3AP56704 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.14□□□□□ -1.91
WNT3AP56704 AL391813.1-201ENST00000603098 260 ntBASIC3.14□□□□□ -1.91
WNT3AP56704 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.14□□□□□ -1.91
WNT3AP56704 AC141273.2-201ENST00000618989 130 ntBASIC3.14□□□□□ -1.91
WNT3AP56704 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
WNT3AP56704 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
WNT3AP56704 AL355596.1-201ENST00000565399 3996 ntBASIC3.14□□□□□ -1.91
WNT3AP56704 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.14□□□□□ -1.91
WNT3AP56704 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
WNT3AP56704 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
WNT3AP56704 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.13□□□□□ -1.91
WNT3AP56704 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
WNT3AP56704 Y_RNA.581-201ENST00000391017 97 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 AL603910.2-201ENST00000407268 136 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 AC009310.1-201ENST00000414414 451 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.13□□□□□ -1.91
WNT3AP56704 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.13□□□□□ -1.91
WNT3AP56704 AC139712.2-201ENST00000424302 339 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 AL365496.1-201ENST00000426885 215 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 AC005002.2-201ENST00000438228 269 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.13□□□□□ -1.91
WNT3AP56704 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.13□□□□□ -1.91
WNT3AP56704 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.13□□□□□ -1.91
WNT3AP56704 RPS27P26-201ENST00000494583 239 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.13□□□□□ -1.91
WNT3AP56704 PHBP14-201ENST00000512887 367 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 AC068657.1-201ENST00000520807 306 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 MIR5047-201ENST00000579212 100 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.13□□□□□ -1.91
WNT3AP56704 MIR3136-201ENST00000583498 78 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 AL034555.1-201ENST00000604816 211 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 MIR622-201ENST00000638396 96 ntBASIC3.13□□□□□ -1.91
WNT3AP56704 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
WNT3AP56704 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.13□□□□□ -1.91
WNT3AP56704 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
WNT3AP56704 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
WNT3AP56704 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.12□□□□□ -1.91
WNT3AP56704 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
WNT3AP56704 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 Y_RNA.65-201ENST00000362846 100 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 SNORD81.1-201ENST00000363064 77 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 RNU6-799P-201ENST00000363567 107 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 Y_RNA.277-201ENST00000364754 102 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 CD24P4-201ENST00000382840 243 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 RNU6-338P-201ENST00000383888 105 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 Y_RNA.478-201ENST00000384358 107 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 SNORD67-201ENST00000390833 111 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
WNT3AP56704 MTND5P15-201ENST00000434246 349 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 AC010095.1-201ENST00000443543 144 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.12□□□□□ -1.91
WNT3AP56704 SNORA25.14-201ENST00000516481 132 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 RN7SKP49-201ENST00000516675 260 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 CYP4A27P-201ENST00000567218 190 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 MIR5004-201ENST00000579078 107 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.12□□□□□ -1.91
WNT3AP56704 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.12□□□□□ -1.91
WNT3AP56704 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.12□□□□□ -1.91
WNT3AP56704 RNU6-91P-201ENST00000607774 107 ntBASIC3.12□□□□□ -1.91
WNT3AP56704 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.12□□□□□ -1.91
WNT3AP56704 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
WNT3AP56704 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
WNT3AP56704 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.11□□□□□ -1.91
WNT3AP56704 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
WNT3AP56704 RNU6-1266P-201ENST00000362794 105 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 RNU6-280P-201ENST00000364145 104 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 Y_RNA.286-201ENST00000364813 102 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 RNU6-1027P-201ENST00000383998 107 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 Y_RNA.539-201ENST00000384635 107 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
WNT3AP56704 U3.26-201ENST00000391236 204 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.11□□□□□ -1.91
WNT3AP56704 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.11□□□□□ -1.91
WNT3AP56704 BX510359.1-201ENST00000456973 237 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 RPS27P29-201ENST00000463110 252 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 RPL36AP48-201ENST00000485521 314 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.11□□□□□ -1.91
WNT3AP56704 RNU6-496P-201ENST00000516145 99 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 RNA5SP54-201ENST00000516951 92 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 AC245166.1-201ENST00000521012 253 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.11□□□□□ -1.91
WNT3AP56704 MIR3923-201ENST00000579521 83 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 AC012493.2-201ENST00000595083 291 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 YPEL5P2-201ENST00000605553 359 ntBASIC3.11□□□□□ -1.91
WNT3AP56704 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.11□□□□□ -1.91
WNT3AP56704 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.11□□□□□ -1.91
WNT3AP56704 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
WNT3AP56704 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms