Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
EPHB4P54760 RNU6-72P-201ENST00000384285 79 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 SNORA53-201ENST00000391141 249 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 RNU6-1140P-201ENST00000410517 106 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 RNU2-68P-201ENST00000410878 191 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 Y_RNA.626-201ENST00000411288 95 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 RPL32P35-201ENST00000415214 394 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 AL353705.4-201ENST00000449661 238 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.5□□□□□ -1.85
EPHB4P54760 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.5□□□□□ -1.85
EPHB4P54760 SEPT14P8-201ENST00000508026 178 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 RNU6-1278P-201ENST00000516130 107 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 SNORA31.8-201ENST00000516327 108 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 AP002826.1-201ENST00000608835 315 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 U6.99-201ENST00000637524 83 ntBASIC3.5□□□□□ -1.85
EPHB4P54760 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.5□□□□□ -1.85
EPHB4P54760 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
EPHB4P54760 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
EPHB4P54760 AL359693.1-201ENST00000614959 2407 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 RNU6-858P-201ENST00000362436 107 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 RNU6-527P-201ENST00000363425 104 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 RNU6-740P-201ENST00000364734 105 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 Y_RNA.286-201ENST00000364813 102 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 Y_RNA.291-201ENST00000364886 113 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 RNA5SP240-201ENST00000365355 128 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 RNU6-741P-201ENST00000383889 107 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
EPHB4P54760 RNU4-30P-201ENST00000410245 143 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.49□□□□□ -1.85
EPHB4P54760 EEF1A1P41-201ENST00000414667 207 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 AC098614.2-201ENST00000426040 255 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 AC005002.2-201ENST00000438228 269 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 AC009969.1-201ENST00000438726 172 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 AL135938.1-201ENST00000443141 297 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 TMSB4XP3-201ENST00000445144 114 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 AC016700.2-201ENST00000446011 156 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 RPL23AP75-201ENST00000491601 451 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 SNORD116-28-201ENST00000516123 91 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 AC022559.1-201ENST00000520905 205 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.49□□□□□ -1.85
EPHB4P54760 H3F3AP1-201ENST00000559984 334 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 MIR4474-201ENST00000579189 78 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 SCARNA4-201ENST00000629045 128 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 IGHVIII-44-202ENST00000636235 289 ntBASIC3.49□□□□□ -1.85
EPHB4P54760 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.49□□□□□ -1.85
EPHB4P54760 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.49□□□□□ -1.85
EPHB4P54760 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
EPHB4P54760 RNU6-1020P-201ENST00000363684 107 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 RNU6-105P-201ENST00000363909 104 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 RNU6-47P-201ENST00000383866 107 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 SNORD63-201ENST00000384262 68 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 RNU6-318P-201ENST00000384283 103 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 MIR32-201ENST00000384965 70 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 RN7SKP220-201ENST00000410611 288 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 HMGN2P20-201ENST00000437531 273 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 CST9LP2-201ENST00000437612 320 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 RPS15AP7-201ENST00000439294 405 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 AC124916.1-201ENST00000444020 547 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.48□□□□□ -1.85
EPHB4P54760 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.48□□□□□ -1.85
EPHB4P54760 RPL23AP49-201ENST00000492925 468 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 RNU2-31P-201ENST00000516954 155 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 MIR4319-201ENST00000577285 85 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 Z83818.1-201ENST00000603584 150 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 AC037487.3-201ENST00000606668 112 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.48□□□□□ -1.85
EPHB4P54760 SCARNA4-202ENST00000625402 129 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 AC021753.1-201ENST00000635724 168 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 AC241585.2-209ENST00000638217 143 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
EPHB4P54760 AC008264.2-201ENST00000610193 3731 ntBASIC3.48□□□□□ -1.85
EPHB4P54760 AC093831.2-201ENST00000624393 3427 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.47□□□□□ -1.85
EPHB4P54760 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
EPHB4P54760 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
EPHB4P54760 RNY4P28-201ENST00000365281 93 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 RNU6-17P-201ENST00000384245 107 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 Y_RNA.504-201ENST00000384481 104 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 RNU6-18P-201ENST00000384527 107 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
EPHB4P54760 AL591034.1-201ENST00000407447 340 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 MIR1290-201ENST00000408735 78 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 SSXP4-201ENST00000451349 245 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.47□□□□□ -1.85
EPHB4P54760 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.47□□□□□ -1.85
EPHB4P54760 AP000870.1-201ENST00000472927 406 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.47□□□□□ -1.85
EPHB4P54760 AL162424.1-201ENST00000602325 221 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 AL713866.2-201ENST00000603579 219 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 RPL23AP88-201ENST00000605759 454 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 SNORD113-5-201ENST00000607261 78 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 AC099506.2-201ENST00000623074 221 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 AC027309.3-201ENST00000623419 351 ntBASIC3.47□□□□□ -1.85
EPHB4P54760 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
EPHB4P54760 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
EPHB4P54760 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
EPHB4P54760 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms