Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AP000275.1-201ENST00000411943 390 ntBASIC1.54□□□□□ -2.16
CASP4P49662 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.54□□□□□ -2.16
CASP4P49662 MTATP6P17-201ENST00000431030 672 ntBASIC1.54□□□□□ -2.16
CASP4P49662 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.54□□□□□ -2.16
CASP4P49662 MTCO1P19-201ENST00000443487 500 ntBASIC1.54□□□□□ -2.16
CASP4P49662 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.54□□□□□ -2.16
CASP4P49662 RNU7-138P-201ENST00000459479 64 ntBASIC1.54□□□□□ -2.16
CASP4P49662 AC108078.1-201ENST00000508073 725 ntBASIC1.54□□□□□ -2.16
CASP4P49662 AC091133.4-201ENST00000511142 308 ntBASIC1.54□□□□□ -2.16
CASP4P49662 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.54□□□□□ -2.16
CASP4P49662 RNVU1-2-201ENST00000516326 135 ntBASIC1.54□□□□□ -2.16
CASP4P49662 EIF4A1P12-201ENST00000551910 141 ntBASIC1.54□□□□□ -2.16
CASP4P49662 CYP4A27P-201ENST00000567218 190 ntBASIC1.54□□□□□ -2.16
CASP4P49662 MIR4424-201ENST00000585257 86 ntBASIC1.54□□□□□ -2.16
CASP4P49662 AC087683.1-201ENST00000591187 441 ntBASIC1.54□□□□□ -2.16
CASP4P49662 AC119751.7-201ENST00000600494 245 ntBASIC1.54□□□□□ -2.16
CASP4P49662 AC007684.1-201ENST00000609671 477 ntBASIC1.54□□□□□ -2.16
CASP4P49662 HULC.1-201ENST00000612720 240 ntBASIC1.54□□□□□ -2.16
CASP4P49662 AL354950.2-201ENST00000617939 290 ntBASIC1.54□□□□□ -2.16
CASP4P49662 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.54□□□□□ -2.16
CASP4P49662 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.54□□□□□ -2.16
CASP4P49662 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CASP4P49662 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
CASP4P49662 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
CASP4P49662 U8.1-201ENST00000362843 134 ntBASIC1.53□□□□□ -2.16
CASP4P49662 Y_RNA.255-201ENST00000364581 97 ntBASIC1.53□□□□□ -2.16
CASP4P49662 Y_RNA.504-201ENST00000384481 104 ntBASIC1.53□□□□□ -2.16
CASP4P49662 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CASP4P49662 Y_RNA.582-201ENST00000391023 95 ntBASIC1.53□□□□□ -2.16
CASP4P49662 RNA5SP100-201ENST00000410903 110 ntBASIC1.53□□□□□ -2.16
CASP4P49662 RNA5SP59-201ENST00000410922 110 ntBASIC1.53□□□□□ -2.16
CASP4P49662 CDK8P2-201ENST00000415020 547 ntBASIC1.53□□□□□ -2.16
CASP4P49662 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.53□□□□□ -2.16
CASP4P49662 SNRPGP13-201ENST00000442212 177 ntBASIC1.53□□□□□ -2.16
CASP4P49662 MTCO2P3-201ENST00000442543 421 ntBASIC1.53□□□□□ -2.16
CASP4P49662 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.53□□□□□ -2.16
CASP4P49662 CCDC34P1-201ENST00000507441 517 ntBASIC1.53□□□□□ -2.16
CASP4P49662 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.53□□□□□ -2.16
CASP4P49662 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.53□□□□□ -2.16
CASP4P49662 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.53□□□□□ -2.16
CASP4P49662 MIR4769-201ENST00000584126 77 ntBASIC1.53□□□□□ -2.16
CASP4P49662 AC078795.3-201ENST00000602913 472 ntBASIC1.53□□□□□ -2.16
CASP4P49662 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.53□□□□□ -2.16
CASP4P49662 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.53□□□□□ -2.16
CASP4P49662 PCGEM1.1-201ENST00000613431 131 ntBASIC1.53□□□□□ -2.16
CASP4P49662 AC009509.4-201ENST00000619202 509 ntBASIC1.53□□□□□ -2.16
CASP4P49662 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.53□□□□□ -2.16
CASP4P49662 AC090582.1-201ENST00000636321 199 ntBASIC1.53□□□□□ -2.16
CASP4P49662 AC245060.5-201ENST00000610778 3293 ntBASIC1.52□□□□□ -2.17
CASP4P49662 SNORD114-6-201ENST00000364393 72 ntBASIC1.52□□□□□ -2.17
CASP4P49662 RNY3P9-201ENST00000384727 106 ntBASIC1.52□□□□□ -2.17
CASP4P49662 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.52□□□□□ -2.17
CASP4P49662 AL353193.1-201ENST00000421444 268 ntBASIC1.52□□□□□ -2.17
CASP4P49662 RPS29P29-201ENST00000456396 171 ntBASIC1.52□□□□□ -2.17
CASP4P49662 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.52□□□□□ -2.17
CASP4P49662 AC130509.1-201ENST00000464158 433 ntBASIC1.52□□□□□ -2.17
CASP4P49662 AC008628.2-201ENST00000502605 298 ntBASIC1.52□□□□□ -2.17
CASP4P49662 AC079140.3-201ENST00000511111 550 ntBASIC1.52□□□□□ -2.17
CASP4P49662 SNORA14.1-201ENST00000516113 141 ntBASIC1.52□□□□□ -2.17
CASP4P49662 SNORA40.12-201ENST00000516329 111 ntBASIC1.52□□□□□ -2.17
CASP4P49662 AP003034.1-201ENST00000534621 422 ntBASIC1.52□□□□□ -2.17
CASP4P49662 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.52□□□□□ -2.17
CASP4P49662 Z98751.3-201ENST00000604447 521 ntBASIC1.52□□□□□ -2.17
CASP4P49662 AC064807.4-201ENST00000607201 407 ntBASIC1.52□□□□□ -2.17
CASP4P49662 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.52□□□□□ -2.17
CASP4P49662 AL450472.1-202ENST00000637286 180 ntBASIC1.52□□□□□ -2.17
CASP4P49662 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
CASP4P49662 Y_RNA.140-201ENST00000363474 103 ntBASIC1.51□□□□□ -2.17
CASP4P49662 SNORA32.2-201ENST00000384049 122 ntBASIC1.51□□□□□ -2.17
CASP4P49662 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CASP4P49662 RNA5SP219-201ENST00000390940 113 ntBASIC1.51□□□□□ -2.17
CASP4P49662 RNU4-55P-201ENST00000410731 137 ntBASIC1.51□□□□□ -2.17
CASP4P49662 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.51□□□□□ -2.17
CASP4P49662 AL121601.2-201ENST00000438019 707 ntBASIC1.51□□□□□ -2.17
CASP4P49662 HMGB1P18-201ENST00000438801 619 ntBASIC1.51□□□□□ -2.17
CASP4P49662 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.51□□□□□ -2.17
CASP4P49662 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.51□□□□□ -2.17
CASP4P49662 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.51□□□□□ -2.17
CASP4P49662 FAM206BP-201ENST00000510179 541 ntBASIC1.51□□□□□ -2.17
CASP4P49662 AC091874.1-201ENST00000511402 339 ntBASIC1.51□□□□□ -2.17
CASP4P49662 RNU5F-4P-201ENST00000516581 114 ntBASIC1.51□□□□□ -2.17
CASP4P49662 SUMO2P18-201ENST00000518873 252 ntBASIC1.51□□□□□ -2.17
CASP4P49662 AP003033.1-201ENST00000527244 415 ntBASIC1.51□□□□□ -2.17
CASP4P49662 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.51□□□□□ -2.17
CASP4P49662 SUB1P4-201ENST00000566062 339 ntBASIC1.51□□□□□ -2.17
CASP4P49662 AC006362.1-201ENST00000567392 174 ntBASIC1.51□□□□□ -2.17
CASP4P49662 VN1R80P-201ENST00000597126 338 ntBASIC1.51□□□□□ -2.17
CASP4P49662 AC005520.5-201ENST00000613926 164 ntBASIC1.51□□□□□ -2.17
CASP4P49662 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.51□□□□□ -2.17
CASP4P49662 RNU6-82P-201ENST00000363970 107 ntBASIC1.5□□□□□ -2.17
CASP4P49662 AC007098.1-201ENST00000420122 367 ntBASIC1.5□□□□□ -2.17
CASP4P49662 AL606489.2-201ENST00000433886 234 ntBASIC1.5□□□□□ -2.17
CASP4P49662 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.5□□□□□ -2.17
CASP4P49662 MTCO2P16-201ENST00000436962 677 ntBASIC1.5□□□□□ -2.17
CASP4P49662 SNRPEP8-201ENST00000442866 260 ntBASIC1.5□□□□□ -2.17
CASP4P49662 FO393415.2-201ENST00000480085 343 ntBASIC1.5□□□□□ -2.17
CASP4P49662 RNU6-189P-201ENST00000516120 101 ntBASIC1.5□□□□□ -2.17
CASP4P49662 Y_RNA.688-201ENST00000516565 95 ntBASIC1.5□□□□□ -2.17
CASP4P49662 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.5□□□□□ -2.17
CASP4P49662 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms