Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NID1P14543 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NID1P14543 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NID1P14543 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.85□□□□□ -1.79
NID1P14543 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.85□□□□□ -1.79
NID1P14543 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NID1P14543 MIR448-201ENST00000362131 111 ntBASIC3.85□□□□□ -1.79
NID1P14543 SNORD73B-201ENST00000364394 72 ntBASIC3.85□□□□□ -1.79
NID1P14543 Y_RNA.346-201ENST00000365385 112 ntBASIC3.85□□□□□ -1.79
NID1P14543 SNORD18B-201ENST00000365659 72 ntBASIC3.85□□□□□ -1.79
NID1P14543 RNU6-1080P-201ENST00000383982 107 ntBASIC3.85□□□□□ -1.79
NID1P14543 RNU6-136P-201ENST00000384663 107 ntBASIC3.85□□□□□ -1.79
NID1P14543 MIR518C-201ENST00000384822 101 ntBASIC3.85□□□□□ -1.79
NID1P14543 MIR548A1-201ENST00000385041 97 ntBASIC3.85□□□□□ -1.79
NID1P14543 MIR670-201ENST00000390142 98 ntBASIC3.85□□□□□ -1.79
NID1P14543 RPS26P8-201ENST00000393490 348 ntBASIC3.85□□□□□ -1.79
NID1P14543 RNA5SP104-201ENST00000410989 118 ntBASIC3.85□□□□□ -1.79
NID1P14543 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.85□□□□□ -1.79
NID1P14543 AC025554.1-201ENST00000505641 188 ntBASIC3.85□□□□□ -1.79
NID1P14543 RPL30P11-203ENST00000598995 310 ntBASIC3.85□□□□□ -1.79
NID1P14543 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.85□□□□□ -1.79
NID1P14543 AC106754.2-201ENST00000623006 233 ntBASIC3.85□□□□□ -1.79
NID1P14543 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NID1P14543 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
NID1P14543 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NID1P14543 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.85□□□□□ -1.79
NID1P14543 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
NID1P14543 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
NID1P14543 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NID1P14543 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NID1P14543 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.84□□□□□ -1.79
NID1P14543 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NID1P14543 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.84□□□□□ -1.79
NID1P14543 RNU6-978P-201ENST00000364371 103 ntBASIC3.84□□□□□ -1.79
NID1P14543 SNORA7.2-201ENST00000364446 145 ntBASIC3.84□□□□□ -1.79
NID1P14543 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
NID1P14543 SNORA18.2-201ENST00000383865 132 ntBASIC3.84□□□□□ -1.79
NID1P14543 U8.12-201ENST00000384701 133 ntBASIC3.84□□□□□ -1.79
NID1P14543 Y_RNA.617-201ENST00000410920 90 ntBASIC3.84□□□□□ -1.79
NID1P14543 AC006028.1-201ENST00000438379 402 ntBASIC3.84□□□□□ -1.79
NID1P14543 Y_RNA.649-201ENST00000459077 103 ntBASIC3.84□□□□□ -1.79
NID1P14543 RPS26P45-201ENST00000471748 340 ntBASIC3.84□□□□□ -1.79
NID1P14543 IGKV2D-19-201ENST00000523346 262 ntBASIC3.84□□□□□ -1.79
NID1P14543 AP003730.1-201ENST00000524605 285 ntBASIC3.84□□□□□ -1.79
NID1P14543 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.84□□□□□ -1.79
NID1P14543 AC091178.2-201ENST00000584401 117 ntBASIC3.84□□□□□ -1.79
NID1P14543 AC131055.1-201ENST00000584626 316 ntBASIC3.84□□□□□ -1.79
NID1P14543 AC006133.1-201ENST00000617106 264 ntBASIC3.84□□□□□ -1.79
NID1P14543 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
NID1P14543 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
NID1P14543 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
NID1P14543 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
NID1P14543 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NID1P14543 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NID1P14543 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NID1P14543 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.83□□□□□ -1.8
NID1P14543 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NID1P14543 SNORD74.4-201ENST00000364129 80 ntBASIC3.83□□□□□ -1.8
NID1P14543 SNORA1.3-201ENST00000384676 136 ntBASIC3.83□□□□□ -1.8
NID1P14543 Y_RNA.587-201ENST00000391210 103 ntBASIC3.83□□□□□ -1.8
NID1P14543 MIR1278-201ENST00000408753 81 ntBASIC3.83□□□□□ -1.8
NID1P14543 RNA5SP317-201ENST00000410176 116 ntBASIC3.83□□□□□ -1.8
NID1P14543 RNA5SP311-201ENST00000411290 116 ntBASIC3.83□□□□□ -1.8
NID1P14543 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.83□□□□□ -1.8
NID1P14543 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.83□□□□□ -1.8
NID1P14543 AC005300.1-201ENST00000428401 373 ntBASIC3.83□□□□□ -1.8
NID1P14543 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.83□□□□□ -1.8
NID1P14543 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.83□□□□□ -1.8
NID1P14543 RNA5SP246-201ENST00000458909 119 ntBASIC3.83□□□□□ -1.8
NID1P14543 RNA5SP315-201ENST00000516340 116 ntBASIC3.83□□□□□ -1.8
NID1P14543 RNA5SP312-201ENST00000517068 116 ntBASIC3.83□□□□□ -1.8
NID1P14543 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.83□□□□□ -1.8
NID1P14543 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.83□□□□□ -1.8
NID1P14543 TVP23BP1-201ENST00000557500 617 ntBASIC3.83□□□□□ -1.8
NID1P14543 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NID1P14543 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NID1P14543 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NID1P14543 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NID1P14543 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.83□□□□□ -1.8
NID1P14543 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NID1P14543 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.82□□□□□ -1.8
NID1P14543 AC068254.2-201ENST00000623938 3577 ntBASIC3.82□□□□□ -1.8
NID1P14543 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NID1P14543 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.82□□□□□ -1.8
NID1P14543 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NID1P14543 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NID1P14543 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NID1P14543 SPRR2C-201ENST00000290702 219 ntBASIC3.82□□□□□ -1.8
NID1P14543 Y_RNA.432-201ENST00000384087 111 ntBASIC3.82□□□□□ -1.8
NID1P14543 RNU1-13P-201ENST00000384499 162 ntBASIC3.82□□□□□ -1.8
NID1P14543 RNA5SP171-201ENST00000391071 115 ntBASIC3.82□□□□□ -1.8
NID1P14543 RNA5SP496-201ENST00000391240 109 ntBASIC3.82□□□□□ -1.8
NID1P14543 AL603914.1-201ENST00000401964 204 ntBASIC3.82□□□□□ -1.8
NID1P14543 RNU6-628P-201ENST00000410675 107 ntBASIC3.82□□□□□ -1.8
NID1P14543 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.82□□□□□ -1.8
NID1P14543 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.82□□□□□ -1.8
NID1P14543 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.82□□□□□ -1.8
NID1P14543 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.82□□□□□ -1.8
NID1P14543 AC010469.1-201ENST00000463864 576 ntBASIC3.82□□□□□ -1.8
NID1P14543 Y_RNA.690-201ENST00000516603 95 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms