Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 MIR181A1-201ENST00000385026 110 ntBASIC1.74□□□□□ -2.13
MMP1P03956 AL590002.1-201ENST00000406554 418 ntBASIC1.74□□□□□ -2.13
MMP1P03956 RNU2-32P-201ENST00000411193 191 ntBASIC1.74□□□□□ -2.13
MMP1P03956 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.74□□□□□ -2.13
MMP1P03956 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.74□□□□□ -2.13
MMP1P03956 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.74□□□□□ -2.13
MMP1P03956 AL121601.2-201ENST00000438019 707 ntBASIC1.74□□□□□ -2.13
MMP1P03956 AL353689.1-201ENST00000438895 199 ntBASIC1.74□□□□□ -2.13
MMP1P03956 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.74□□□□□ -2.13
MMP1P03956 MTND3P16-201ENST00000452205 344 ntBASIC1.74□□□□□ -2.13
MMP1P03956 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MMP1P03956 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.74□□□□□ -2.13
MMP1P03956 CENPUP1-201ENST00000526649 1202 ntBASIC1.74□□□□□ -2.13
MMP1P03956 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.74□□□□□ -2.13
MMP1P03956 AC012557.2-201ENST00000605919 418 ntBASIC1.74□□□□□ -2.13
MMP1P03956 AL159153.1-201ENST00000619688 317 ntBASIC1.74□□□□□ -2.13
MMP1P03956 AC068137.3-201ENST00000639191 341 ntBASIC1.74□□□□□ -2.13
MMP1P03956 AC027514.1-201ENST00000588561 1603 ntBASIC1.73□□□□□ -2.13
MMP1P03956 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MMP1P03956 RNA5SP276-201ENST00000362580 94 ntBASIC1.73□□□□□ -2.13
MMP1P03956 RNU6-451P-201ENST00000362921 107 ntBASIC1.73□□□□□ -2.13
MMP1P03956 RNU1-42P-201ENST00000364033 160 ntBASIC1.73□□□□□ -2.13
MMP1P03956 RNU6-234P-201ENST00000365229 104 ntBASIC1.73□□□□□ -2.13
MMP1P03956 RNU5E-7P-201ENST00000365290 117 ntBASIC1.73□□□□□ -2.13
MMP1P03956 RNU6-546P-201ENST00000383991 107 ntBASIC1.73□□□□□ -2.13
MMP1P03956 RNU6-611P-201ENST00000384276 104 ntBASIC1.73□□□□□ -2.13
MMP1P03956 MIR517C-201ENST00000385103 95 ntBASIC1.73□□□□□ -2.13
MMP1P03956 RNA5SP219-201ENST00000390940 113 ntBASIC1.73□□□□□ -2.13
MMP1P03956 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.73□□□□□ -2.13
MMP1P03956 AC007969.2-201ENST00000441891 191 ntBASIC1.73□□□□□ -2.13
MMP1P03956 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.73□□□□□ -2.13
MMP1P03956 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.73□□□□□ -2.13
MMP1P03956 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.73□□□□□ -2.13
MMP1P03956 AC013470.1-201ENST00000453438 462 ntBASIC1.73□□□□□ -2.13
MMP1P03956 PMCHL2-203ENST00000457791 237 ntBASIC1.73□□□□□ -2.13
MMP1P03956 snoU13.18-201ENST00000459483 104 ntBASIC1.73□□□□□ -2.13
MMP1P03956 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.73□□□□□ -2.13
MMP1P03956 AC018630.3-201ENST00000542637 96 ntBASIC1.73□□□□□ -2.13
MMP1P03956 AL157687.1-201ENST00000554853 619 ntBASIC1.73□□□□□ -2.13
MMP1P03956 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.73□□□□□ -2.13
MMP1P03956 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.73□□□□□ -2.13
MMP1P03956 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.73□□□□□ -2.13
MMP1P03956 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
MMP1P03956 Z82243.1-201ENST00000609432 473 ntBASIC1.73□□□□□ -2.13
MMP1P03956 AC090517.2-201ENST00000614966 680 ntBASIC1.73□□□□□ -2.13
MMP1P03956 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.73□□□□□ -2.13
MMP1P03956 AL359314.1-201ENST00000616913 261 ntBASIC1.73□□□□□ -2.13
MMP1P03956 AL132822.1-201ENST00000617063 513 ntBASIC1.73□□□□□ -2.13
MMP1P03956 AC103705.1-201ENST00000619013 241 ntBASIC1.73□□□□□ -2.13
MMP1P03956 FER-210ENST00000628534 558 ntTSL 5 BASIC1.73□□□□□ -2.13
MMP1P03956 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MMP1P03956 RNY3P3-201ENST00000363816 102 ntBASIC1.72□□□□□ -2.13
MMP1P03956 RNU4-66P-201ENST00000365199 138 ntBASIC1.72□□□□□ -2.13
MMP1P03956 MIR29B2-201ENST00000385055 81 ntBASIC1.72□□□□□ -2.13
MMP1P03956 MIR29C-201ENST00000385231 88 ntBASIC1.72□□□□□ -2.13
MMP1P03956 MIR676-201ENST00000390702 67 ntBASIC1.72□□□□□ -2.13
MMP1P03956 MIR1304-201ENST00000408243 91 ntBASIC1.72□□□□□ -2.13
MMP1P03956 MIR548F1-201ENST00000408667 84 ntBASIC1.72□□□□□ -2.13
MMP1P03956 AL117339.3-201ENST00000418733 162 ntBASIC1.72□□□□□ -2.13
MMP1P03956 MTCO1P20-201ENST00000425366 358 ntBASIC1.72□□□□□ -2.13
MMP1P03956 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.72□□□□□ -2.13
MMP1P03956 SEPT14P3-201ENST00000439401 183 ntBASIC1.72□□□□□ -2.13
MMP1P03956 AL732372.2-207ENST00000445840 183 ntBASIC1.72□□□□□ -2.13
MMP1P03956 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.72□□□□□ -2.13
MMP1P03956 SEPT14P2-201ENST00000453405 183 ntBASIC1.72□□□□□ -2.13
MMP1P03956 TOMM22P6-201ENST00000465035 409 ntBASIC1.72□□□□□ -2.13
MMP1P03956 HMGB3P17-201ENST00000504195 649 ntBASIC1.72□□□□□ -2.13
MMP1P03956 SEPT14P4-201ENST00000513445 186 ntBASIC1.72□□□□□ -2.13
MMP1P03956 SNORA14.1-201ENST00000516113 141 ntBASIC1.72□□□□□ -2.13
MMP1P03956 FO082796.1-201ENST00000523795 183 ntBASIC1.72□□□□□ -2.13
MMP1P03956 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.72□□□□□ -2.13
MMP1P03956 AC022616.8-201ENST00000533569 253 ntBASIC1.72□□□□□ -2.13
MMP1P03956 AC010928.2-201ENST00000588017 287 ntBASIC1.72□□□□□ -2.13
MMP1P03956 AL162413.1-201ENST00000603198 110 ntBASIC1.72□□□□□ -2.13
MMP1P03956 AC005034.5-201ENST00000604219 466 ntBASIC1.72□□□□□ -2.13
MMP1P03956 RNU6-89P-201ENST00000606519 100 ntBASIC1.72□□□□□ -2.13
MMP1P03956 AC004492.1-201ENST00000607036 742 ntBASIC1.72□□□□□ -2.13
MMP1P03956 AC092807.2-201ENST00000609367 243 ntBASIC1.72□□□□□ -2.13
MMP1P03956 U2.17-201ENST00000611454 95 ntBASIC1.72□□□□□ -2.13
MMP1P03956 MIR6504-201ENST00000613520 61 ntBASIC1.72□□□□□ -2.13
MMP1P03956 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
MMP1P03956 AC097372.5-201ENST00000623665 376 ntBASIC1.72□□□□□ -2.13
MMP1P03956 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.72□□□□□ -2.13
MMP1P03956 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
MMP1P03956 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.71□□□□□ -2.14
MMP1P03956 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.71□□□□□ -2.14
MMP1P03956 RNU6-428P-201ENST00000362942 107 ntBASIC1.71□□□□□ -2.14
MMP1P03956 RNY4P14-201ENST00000363656 96 ntBASIC1.71□□□□□ -2.14
MMP1P03956 RNU6-105P-201ENST00000363909 104 ntBASIC1.71□□□□□ -2.14
MMP1P03956 RNU6-82P-201ENST00000363970 107 ntBASIC1.71□□□□□ -2.14
MMP1P03956 RNU4-13P-201ENST00000364019 141 ntBASIC1.71□□□□□ -2.14
MMP1P03956 RNU6-944P-201ENST00000364023 107 ntBASIC1.71□□□□□ -2.14
MMP1P03956 Y_RNA.231-201ENST00000364358 102 ntBASIC1.71□□□□□ -2.14
MMP1P03956 Y_RNA.450-201ENST00000384198 113 ntBASIC1.71□□□□□ -2.14
MMP1P03956 SNORD37.1-201ENST00000390968 65 ntBASIC1.71□□□□□ -2.14
MMP1P03956 SNORA67.6-201ENST00000391093 99 ntBASIC1.71□□□□□ -2.14
MMP1P03956 AL158823.1-201ENST00000418441 478 ntBASIC1.71□□□□□ -2.14
MMP1P03956 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.71□□□□□ -2.14
MMP1P03956 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.71□□□□□ -2.14
MMP1P03956 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms