Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 Y_RNA.159-201ENST00000363674 87 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 RNU6-487P-201ENST00000365430 104 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 RNU6-456P-201ENST00000384493 107 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 MIR454-201ENST00000390180 115 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
COL4A1P02462 RNU6-903P-201ENST00000391270 109 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 SNORA26.8-201ENST00000391306 124 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 MIR1262-201ENST00000408276 93 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AL360271.2-201ENST00000447710 161 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 ART2BP-201ENST00000453501 499 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 SCARNA18-201ENST00000459004 134 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AC079382.1-201ENST00000493346 557 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A1P02462 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.88□□□□□ -2.27
COL4A1P02462 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A1P02462 SNORA4.4-201ENST00000515921 135 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 RNU6-1178P-201ENST00000516674 107 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 RNA5SP137-201ENST00000516833 135 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A1P02462 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.88□□□□□ -2.27
COL4A1P02462 AP002453.2-201ENST00000533503 320 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AL160236.1-201ENST00000556317 195 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AC233702.2-202ENST00000562547 291 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AL391840.1-201ENST00000571144 367 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AC064872.1-201ENST00000604823 1072 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AL022345.1-201ENST00000607292 135 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AL603755.1-201ENST00000619504 163 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AC008993.2-201ENST00000631744 806 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
COL4A1P02462 RNA5SP276-201ENST00000362580 94 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 RNU6-428P-201ENST00000362942 107 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 Y_RNA.169-201ENST00000363745 96 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 RNU6-434P-201ENST00000384376 107 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 RNU6-393P-201ENST00000384475 107 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 RNU6-1222P-201ENST00000384615 107 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 RNU6-297P-201ENST00000384636 107 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 SNORD70.1-201ENST00000391007 85 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.87□□□□□ -2.27
COL4A1P02462 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
COL4A1P02462 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.87□□□□□ -2.27
COL4A1P02462 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.87□□□□□ -2.27
COL4A1P02462 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.87□□□□□ -2.27
COL4A1P02462 AC103851.1-201ENST00000506833 274 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 MTND3P5-201ENST00000512798 333 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 RNU6-965P-201ENST00000516721 96 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 RNU6-685P-201ENST00000517088 95 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 AC007834.2-201ENST00000536310 343 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.87□□□□□ -2.27
COL4A1P02462 MTND3P12-201ENST00000559068 328 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 AC093249.1-201ENST00000567049 203 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 MIR4713-201ENST00000582691 75 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 MIR548AC-201ENST00000585049 88 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 AC243960.4-201ENST00000600532 288 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 BNIP3P30-201ENST00000601184 574 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.87□□□□□ -2.27
COL4A1P02462 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
COL4A1P02462 RNU1-23P-201ENST00000363361 144 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 SNORA25B-201ENST00000365507 128 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 RNU4-48P-201ENST00000365559 182 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 RNU6-35P-201ENST00000384530 107 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 RAP1BP3-201ENST00000407180 549 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 OR9R1P-201ENST00000412200 877 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 RPS15AP10-201ENST00000432472 382 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A1P02462 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.86□□□□□ -2.27
COL4A1P02462 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A1P02462 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A1P02462 PRELID3BP1-201ENST00000457142 540 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 AC093259.1-201ENST00000509755 300 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 MTND1P22-201ENST00000510572 951 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 SNORA18.6-201ENST00000516792 115 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 RNU6-410P-201ENST00000517006 107 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A1P02462 CYCSP27-201ENST00000527643 293 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 AP003484.1-201ENST00000530974 250 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 LRRC34P1-201ENST00000542742 915 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.86□□□□□ -2.27
COL4A1P02462 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A1P02462 MIR4711-201ENST00000578274 70 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 AC025449.1-201ENST00000603896 529 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 Z82243.1-201ENST00000609432 473 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 MIR2909-201ENST00000617113 69 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 Z69720.2-201ENST00000624755 279 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 SCARNA4-202ENST00000625402 129 ntBASIC0.86□□□□□ -2.27
COL4A1P02462 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A1P02462 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A1P02462 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.86□□□□□ -2.27
COL4A1P02462 RNU1-58P-201ENST00000362413 163 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
COL4A1P02462 RNU6-1103P-201ENST00000384150 107 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 RNU6-550P-201ENST00000391057 101 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 MIR1283-2-201ENST00000408621 87 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.85□□□□□ -2.27
COL4A1P02462 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.85□□□□□ -2.27
COL4A1P02462 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.85□□□□□ -2.27
COL4A1P02462 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.85□□□□□ -2.27
COL4A1P02462 RPL39P29-201ENST00000447779 157 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 AC013470.1-201ENST00000453438 462 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms