Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF40O75150 MIR1185-2-201ENST00000408687 86 ntBASIC4.75□□□□□ -1.65
RNF40O75150 SNORD108-201ENST00000459332 71 ntBASIC4.75□□□□□ -1.65
RNF40O75150 RPS26P55-201ENST00000471178 356 ntBASIC4.75□□□□□ -1.65
RNF40O75150 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RNF40O75150 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF40O75150 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.75□□□□□ -1.65
RNF40O75150 MIR3160-1-201ENST00000577972 85 ntBASIC4.75□□□□□ -1.65
RNF40O75150 MIR1254-2-201ENST00000579553 63 ntBASIC4.75□□□□□ -1.65
RNF40O75150 AC005972.2-201ENST00000604690 348 ntBASIC4.75□□□□□ -1.65
RNF40O75150 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF40O75150 AL035470.1-201ENST00000622571 220 ntBASIC4.75□□□□□ -1.65
RNF40O75150 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF40O75150 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RNF40O75150 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF40O75150 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF40O75150 AL136360.1-201ENST00000503377 1900 ntBASIC4.74□□□□□ -1.65
RNF40O75150 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF40O75150 RNU6-529P-201ENST00000363383 104 ntBASIC4.74□□□□□ -1.65
RNF40O75150 MIR586-201ENST00000385035 97 ntBASIC4.74□□□□□ -1.65
RNF40O75150 MIR29B2-201ENST00000385055 81 ntBASIC4.74□□□□□ -1.65
RNF40O75150 MIR708-201ENST00000390708 88 ntBASIC4.74□□□□□ -1.65
RNF40O75150 MIR1263-201ENST00000408324 86 ntBASIC4.74□□□□□ -1.65
RNF40O75150 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF40O75150 HMGN2P21-201ENST00000447764 270 ntBASIC4.74□□□□□ -1.65
RNF40O75150 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF40O75150 AL365205.2-201ENST00000594586 68 ntBASIC4.74□□□□□ -1.65
RNF40O75150 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF40O75150 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF40O75150 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF40O75150 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF40O75150 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RNF40O75150 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF40O75150 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF40O75150 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF40O75150 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF40O75150 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF40O75150 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF40O75150 AC010300.1-201ENST00000600671 5134 ntBASIC4.73□□□□□ -1.65
RNF40O75150 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RNF40O75150 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF40O75150 RNU1-15P-201ENST00000353977 144 ntBASIC4.73□□□□□ -1.65
RNF40O75150 RNY1P7-201ENST00000384743 110 ntBASIC4.73□□□□□ -1.65
RNF40O75150 Z98745.1-201ENST00000402553 494 ntBASIC4.73□□□□□ -1.65
RNF40O75150 RN7SKP27-201ENST00000410684 333 ntBASIC4.73□□□□□ -1.65
RNF40O75150 RNU2-32P-201ENST00000411193 191 ntBASIC4.73□□□□□ -1.65
RNF40O75150 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.73□□□□□ -1.65
RNF40O75150 SCARNA10-201ENST00000459255 330 ntBASIC4.73□□□□□ -1.65
RNF40O75150 RPL39P34-201ENST00000477141 156 ntBASIC4.73□□□□□ -1.65
RNF40O75150 AC021205.2-201ENST00000480069 347 ntBASIC4.73□□□□□ -1.65
RNF40O75150 AC078817.1-201ENST00000492623 435 ntBASIC4.73□□□□□ -1.65
RNF40O75150 ATP5EP1-201ENST00000510257 156 ntBASIC4.73□□□□□ -1.65
RNF40O75150 RNA5SP281-201ENST00000516504 135 ntBASIC4.73□□□□□ -1.65
RNF40O75150 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF40O75150 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF40O75150 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RNF40O75150 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF40O75150 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF40O75150 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF40O75150 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF40O75150 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF40O75150 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF40O75150 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF40O75150 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF40O75150 AC021146.4-201ENST00000309229 279 ntBASIC4.72□□□□□ -1.65
RNF40O75150 SNORA27.1-201ENST00000362604 124 ntBASIC4.72□□□□□ -1.65
RNF40O75150 PPIAP31-201ENST00000405422 495 ntBASIC4.72□□□□□ -1.65
RNF40O75150 RNA5SP127-201ENST00000411051 133 ntBASIC4.72□□□□□ -1.65
RNF40O75150 RPS3AP1-201ENST00000413190 320 ntBASIC4.72□□□□□ -1.65
RNF40O75150 AL356387.2-201ENST00000422272 243 ntBASIC4.72□□□□□ -1.65
RNF40O75150 AC145146.1-201ENST00000496370 254 ntBASIC4.72□□□□□ -1.65
RNF40O75150 RNU6-1073P-201ENST00000517182 106 ntBASIC4.72□□□□□ -1.65
RNF40O75150 AC025647.1-201ENST00000517879 253 ntBASIC4.72□□□□□ -1.65
RNF40O75150 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF40O75150 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF40O75150 MIR3138-201ENST00000585238 82 ntBASIC4.72□□□□□ -1.65
RNF40O75150 AC015726.2-201ENST00000620112 122 ntBASIC4.72□□□□□ -1.65
RNF40O75150 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RNF40O75150 AC091905.2-201ENST00000623143 306 ntBASIC4.72□□□□□ -1.65
RNF40O75150 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RNF40O75150 AC007256.1-201ENST00000392253 2765 ntBASIC4.72□□□□□ -1.65
RNF40O75150 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF40O75150 ZFRP1-201ENST00000457579 2970 ntBASIC4.72□□□□□ -1.65
RNF40O75150 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.72□□□□□ -1.65
RNF40O75150 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF40O75150 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF40O75150 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF40O75150 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RNF40O75150 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF40O75150 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.71□□□□□ -1.65
RNF40O75150 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF40O75150 RNU6-1010P-201ENST00000362757 107 ntBASIC4.71□□□□□ -1.66
RNF40O75150 SNORA1.3-201ENST00000384676 136 ntBASIC4.71□□□□□ -1.66
RNF40O75150 SNORA57.1-201ENST00000391227 145 ntBASIC4.71□□□□□ -1.66
RNF40O75150 AL139095.1-201ENST00000404326 391 ntBASIC4.71□□□□□ -1.66
RNF40O75150 RNU2-70P-201ENST00000410718 179 ntBASIC4.71□□□□□ -1.66
RNF40O75150 AC002075.2-201ENST00000425207 252 ntBASIC4.71□□□□□ -1.66
RNF40O75150 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF40O75150 PARP4P3-201ENST00000510265 317 ntBASIC4.71□□□□□ -1.66
RNF40O75150 VWA8P1-201ENST00000510889 176 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms