Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.69□□□□□ -1.66
ACTN4O43707 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.69□□□□□ -1.66
ACTN4O43707 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.69□□□□□ -1.66
ACTN4O43707 PRELID2P1-201ENST00000552837 301 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 MIR4700-201ENST00000578311 74 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 AC024220.1-201ENST00000603675 484 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 AC022893.2-201ENST00000564832 3296 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 AC007496.3-201ENST00000624987 3443 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ACTN4O43707 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ACTN4O43707 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ACTN4O43707 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.68□□□□□ -1.66
ACTN4O43707 RNU6-674P-201ENST00000363831 107 ntBASIC4.68□□□□□ -1.66
ACTN4O43707 RNU6-1305P-201ENST00000364353 104 ntBASIC4.68□□□□□ -1.66
ACTN4O43707 Y_RNA.328-201ENST00000365208 113 ntBASIC4.68□□□□□ -1.66
ACTN4O43707 SNORA51.5-201ENST00000384126 131 ntBASIC4.68□□□□□ -1.66
ACTN4O43707 HMGN2P20-201ENST00000437531 273 ntBASIC4.68□□□□□ -1.66
ACTN4O43707 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
ACTN4O43707 AC025445.1-201ENST00000502728 300 ntBASIC4.68□□□□□ -1.66
ACTN4O43707 RNA5SP153-201ENST00000516498 76 ntBASIC4.68□□□□□ -1.66
ACTN4O43707 RNU6-928P-201ENST00000516876 104 ntBASIC4.68□□□□□ -1.66
ACTN4O43707 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.68□□□□□ -1.66
ACTN4O43707 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ACTN4O43707 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTN4O43707 AC005972.2-201ENST00000604690 348 ntBASIC4.68□□□□□ -1.66
ACTN4O43707 AL021707.8-201ENST00000609428 183 ntBASIC4.68□□□□□ -1.66
ACTN4O43707 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.68□□□□□ -1.66
ACTN4O43707 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.68□□□□□ -1.66
ACTN4O43707 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
ACTN4O43707 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ACTN4O43707 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ACTN4O43707 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ACTN4O43707 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ACTN4O43707 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ACTN4O43707 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ACTN4O43707 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
ACTN4O43707 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.67□□□□□ -1.66
ACTN4O43707 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.67□□□□□ -1.66
ACTN4O43707 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.67□□□□□ -1.66
ACTN4O43707 RNU6-600P-201ENST00000362524 99 ntBASIC4.67□□□□□ -1.66
ACTN4O43707 RNA5SP443-201ENST00000363083 132 ntBASIC4.67□□□□□ -1.66
ACTN4O43707 Y_RNA.163-201ENST00000363702 113 ntBASIC4.67□□□□□ -1.66
ACTN4O43707 SNORA7.2-201ENST00000364446 145 ntBASIC4.67□□□□□ -1.66
ACTN4O43707 RNA5SP125-201ENST00000364843 120 ntBASIC4.67□□□□□ -1.66
ACTN4O43707 RNU6-1275P-201ENST00000391087 107 ntBASIC4.67□□□□□ -1.66
ACTN4O43707 MIR1302-5-201ENST00000408164 150 ntBASIC4.67□□□□□ -1.66
ACTN4O43707 MIR1263-201ENST00000408324 86 ntBASIC4.67□□□□□ -1.66
ACTN4O43707 RNA5SP104-201ENST00000410989 118 ntBASIC4.67□□□□□ -1.66
ACTN4O43707 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.67□□□□□ -1.66
ACTN4O43707 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.67□□□□□ -1.66
ACTN4O43707 AC068287.1-201ENST00000430283 295 ntBASIC4.67□□□□□ -1.66
ACTN4O43707 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.67□□□□□ -1.66
ACTN4O43707 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.67□□□□□ -1.66
ACTN4O43707 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.67□□□□□ -1.66
ACTN4O43707 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ACTN4O43707 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ACTN4O43707 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ACTN4O43707 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ACTN4O43707 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ACTN4O43707 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ACTN4O43707 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
ACTN4O43707 Y_RNA.40-201ENST00000362645 93 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 RNA5SP513-201ENST00000364648 118 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 U3.15-201ENST00000365398 212 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ACTN4O43707 SNORD12C-201ENST00000386307 89 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 RNA5SP39-201ENST00000411245 120 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 AL121890.1-201ENST00000435457 205 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 RPL36AP21-201ENST00000490372 323 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 SNORA40.13-201ENST00000516379 120 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 SNORA18.4-201ENST00000516440 124 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 HSPE1P18-201ENST00000517602 280 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.66□□□□□ -1.66
ACTN4O43707 AC007012.1-201ENST00000567192 175 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 AC022655.2-201ENST00000577280 318 ntBASIC4.66□□□□□ -1.66
ACTN4O43707 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
ACTN4O43707 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTN4O43707 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.66□□□□□ -1.66
ACTN4O43707 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ACTN4O43707 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
ACTN4O43707 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
ACTN4O43707 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
ACTN4O43707 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ACTN4O43707 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
ACTN4O43707 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ACTN4O43707 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
ACTN4O43707 Y_RNA.85-201ENST00000363014 111 ntBASIC4.65□□□□□ -1.67
ACTN4O43707 DYNLT3P1-201ENST00000378574 347 ntBASIC4.65□□□□□ -1.67
ACTN4O43707 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.65□□□□□ -1.67
ACTN4O43707 AL445584.1-201ENST00000431451 330 ntBASIC4.65□□□□□ -1.67
ACTN4O43707 RNA5SP246-201ENST00000458909 119 ntBASIC4.65□□□□□ -1.67
ACTN4O43707 RPS29P22-201ENST00000472363 168 ntBASIC4.65□□□□□ -1.67
ACTN4O43707 AC105137.1-201ENST00000484355 562 ntBASIC4.65□□□□□ -1.67
ACTN4O43707 RNU1-104P-201ENST00000517280 175 ntBASIC4.65□□□□□ -1.67
ACTN4O43707 MIR7151-201ENST00000617477 60 ntBASIC4.65□□□□□ -1.67
ACTN4O43707 AC009831.4-201ENST00000620744 325 ntBASIC4.65□□□□□ -1.67
ACTN4O43707 AC112200.1-201ENST00000625015 234 ntBASIC4.65□□□□□ -1.67
ACTN4O43707 AL159152.1-201ENST00000635019 2587 ntBASIC4.65□□□□□ -1.67
ACTN4O43707 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ACTN4O43707 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms