Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AL512286.1-201ENST00000439244 400 ntBASIC0.83□□□□□ -2.28
SGCEO43556 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.83□□□□□ -2.28
SGCEO43556 AC244505.5-201ENST00000443639 207 ntBASIC0.83□□□□□ -2.28
SGCEO43556 PRPS1P1-201ENST00000445305 876 ntBASIC0.83□□□□□ -2.28
SGCEO43556 MTND1P18-201ENST00000448191 573 ntBASIC0.83□□□□□ -2.28
SGCEO43556 AC005840.1-201ENST00000498412 377 ntBASIC0.83□□□□□ -2.28
SGCEO43556 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.83□□□□□ -2.28
SGCEO43556 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.83□□□□□ -2.28
SGCEO43556 RNU6-1178P-201ENST00000516674 107 ntBASIC0.83□□□□□ -2.28
SGCEO43556 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.83□□□□□ -2.28
SGCEO43556 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.83□□□□□ -2.28
SGCEO43556 SNORA59B-202ENST00000578183 701 ntBASIC0.83□□□□□ -2.28
SGCEO43556 Z98751.3-201ENST00000604447 521 ntBASIC0.83□□□□□ -2.28
SGCEO43556 CTHRC1P1-201ENST00000605383 469 ntBASIC0.83□□□□□ -2.28
SGCEO43556 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SGCEO43556 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SGCEO43556 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SGCEO43556 MIR222-201ENST00000384992 110 ntBASIC0.82□□□□□ -2.28
SGCEO43556 RNU6-550P-201ENST00000391057 101 ntBASIC0.82□□□□□ -2.28
SGCEO43556 RNU6-321P-201ENST00000410912 106 ntBASIC0.82□□□□□ -2.28
SGCEO43556 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.82□□□□□ -2.28
SGCEO43556 AC060773.1-201ENST00000421698 310 ntBASIC0.82□□□□□ -2.28
SGCEO43556 AC013410.2-201ENST00000422627 201 ntBASIC0.82□□□□□ -2.28
SGCEO43556 SNAP23P1-201ENST00000433229 246 ntBASIC0.82□□□□□ -2.28
SGCEO43556 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.82□□□□□ -2.28
SGCEO43556 AL606662.1-201ENST00000445763 553 ntBASIC0.82□□□□□ -2.28
SGCEO43556 ARL2BPP4-201ENST00000506854 471 ntBASIC0.82□□□□□ -2.28
SGCEO43556 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.82□□□□□ -2.28
SGCEO43556 SCARNA24.1-201ENST00000516465 137 ntBASIC0.82□□□□□ -2.28
SGCEO43556 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.82□□□□□ -2.28
SGCEO43556 AC022878.1-201ENST00000530684 149 ntBASIC0.82□□□□□ -2.28
SGCEO43556 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.82□□□□□ -2.28
SGCEO43556 AC005771.1-201ENST00000585581 349 ntBASIC0.82□□□□□ -2.28
SGCEO43556 AC016727.1-205ENST00000605437 569 ntBASIC0.82□□□□□ -2.28
SGCEO43556 AC009994.1-201ENST00000606889 253 ntBASIC0.82□□□□□ -2.28
SGCEO43556 AL021879.1-201ENST00000611756 288 ntBASIC0.82□□□□□ -2.28
SGCEO43556 AC027807.2-201ENST00000616099 408 ntBASIC0.82□□□□□ -2.28
SGCEO43556 MTND4P9-201ENST00000507819 1346 ntBASIC0.82□□□□□ -2.28
SGCEO43556 RNU6-715P-201ENST00000365204 103 ntBASIC0.81□□□□□ -2.28
SGCEO43556 Y_RNA.480-201ENST00000384364 102 ntBASIC0.81□□□□□ -2.28
SGCEO43556 MIR515-2-201ENST00000384883 83 ntBASIC0.81□□□□□ -2.28
SGCEO43556 MIR515-1-201ENST00000384884 83 ntBASIC0.81□□□□□ -2.28
SGCEO43556 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
SGCEO43556 POLR2J4-204ENST00000418424 324 ntBASIC0.81□□□□□ -2.28
SGCEO43556 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.81□□□□□ -2.28
SGCEO43556 USP9YP28-201ENST00000435142 589 ntBASIC0.81□□□□□ -2.28
SGCEO43556 USP9YP12-201ENST00000450481 570 ntBASIC0.81□□□□□ -2.28
SGCEO43556 RPS27P1-201ENST00000450552 247 ntBASIC0.81□□□□□ -2.28
SGCEO43556 RNU7-34P-201ENST00000459394 64 ntBASIC0.81□□□□□ -2.28
SGCEO43556 HMGN1P7-201ENST00000491722 313 ntBASIC0.81□□□□□ -2.28
SGCEO43556 AC008628.2-201ENST00000502605 298 ntBASIC0.81□□□□□ -2.28
SGCEO43556 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.81□□□□□ -2.28
SGCEO43556 MTCO3P7-201ENST00000510008 774 ntBASIC0.81□□□□□ -2.28
SGCEO43556 SNORA70.22-201ENST00000517160 124 ntBASIC0.81□□□□□ -2.28
SGCEO43556 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.81□□□□□ -2.28
SGCEO43556 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.81□□□□□ -2.28
SGCEO43556 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.81□□□□□ -2.28
SGCEO43556 AC112191.3-201ENST00000604371 277 ntBASIC0.81□□□□□ -2.28
SGCEO43556 AL020996.3-201ENST00000606617 222 ntBASIC0.81□□□□□ -2.28
SGCEO43556 AL359697.1-201ENST00000624879 587 ntBASIC0.81□□□□□ -2.28
SGCEO43556 MIR338-201ENST00000636369 67 ntBASIC0.81□□□□□ -2.28
SGCEO43556 AC068647.2-201ENST00000637380 353 ntBASIC0.81□□□□□ -2.28
SGCEO43556 BX322639.1-202ENST00000423987 2213 ntBASIC0.81□□□□□ -2.28
SGCEO43556 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.81□□□□□ -2.28
SGCEO43556 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SGCEO43556 RNU6-562P-201ENST00000362731 107 ntBASIC0.8□□□□□ -2.28
SGCEO43556 RNU6-534P-201ENST00000364877 106 ntBASIC0.8□□□□□ -2.28
SGCEO43556 RNU1-36P-201ENST00000365130 165 ntBASIC0.8□□□□□ -2.28
SGCEO43556 SNORA4.2-201ENST00000365313 147 ntBASIC0.8□□□□□ -2.28
SGCEO43556 RNU6-169P-201ENST00000365336 107 ntBASIC0.8□□□□□ -2.28
SGCEO43556 RNU5E-5P-201ENST00000365379 116 ntBASIC0.8□□□□□ -2.28
SGCEO43556 RNU6-418P-201ENST00000384035 107 ntBASIC0.8□□□□□ -2.28
SGCEO43556 Y_RNA.504-201ENST00000384481 104 ntBASIC0.8□□□□□ -2.28
SGCEO43556 RNU6-950P-201ENST00000384651 107 ntBASIC0.8□□□□□ -2.28
SGCEO43556 MIR208B-201ENST00000401172 77 ntBASIC0.8□□□□□ -2.28
SGCEO43556 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.8□□□□□ -2.28
SGCEO43556 LRRC34P2-201ENST00000514850 553 ntBASIC0.8□□□□□ -2.28
SGCEO43556 RNU6-1053P-201ENST00000515930 101 ntBASIC0.8□□□□□ -2.28
SGCEO43556 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.8□□□□□ -2.28
SGCEO43556 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.8□□□□□ -2.28
SGCEO43556 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.8□□□□□ -2.28
SGCEO43556 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
SGCEO43556 AC009159.2-201ENST00000617603 606 ntBASIC0.8□□□□□ -2.28
SGCEO43556 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.8□□□□□ -2.28
SGCEO43556 AC011155.2-201ENST00000623202 216 ntBASIC0.8□□□□□ -2.28
SGCEO43556 RNY1P10-201ENST00000363268 113 ntBASIC0.79□□□□□ -2.28
SGCEO43556 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
SGCEO43556 AP000275.1-201ENST00000411943 390 ntBASIC0.79□□□□□ -2.28
SGCEO43556 AL008987.1-201ENST00000415528 237 ntBASIC0.79□□□□□ -2.28
SGCEO43556 AL117339.3-201ENST00000418733 162 ntBASIC0.79□□□□□ -2.28
SGCEO43556 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.79□□□□□ -2.28
SGCEO43556 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.79□□□□□ -2.28
SGCEO43556 GTF2IP13-201ENST00000438487 386 ntBASIC0.79□□□□□ -2.28
SGCEO43556 HMGN1P12-201ENST00000499125 195 ntBASIC0.79□□□□□ -2.28
SGCEO43556 UBE2V1P12-201ENST00000503954 474 ntBASIC0.79□□□□□ -2.28
SGCEO43556 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.79□□□□□ -2.28
SGCEO43556 AK3P2-201ENST00000507976 429 ntBASIC0.79□□□□□ -2.28
SGCEO43556 RNU6-1146P-201ENST00000516282 102 ntBASIC0.79□□□□□ -2.28
SGCEO43556 RNU6-948P-201ENST00000516374 107 ntBASIC0.79□□□□□ -2.28
SGCEO43556 SCARNA16.2-201ENST00000516520 172 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms