Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
MSH5O43196 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC7.12□□□□□ -1.27
MSH5O43196 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
MSH5O43196 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MSH5O43196 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
MSH5O43196 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MSH5O43196 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
MSH5O43196 RNU6-154P-201ENST00000384306 106 ntBASIC7.12□□□□□ -1.27
MSH5O43196 RNA5SP339-201ENST00000390987 122 ntBASIC7.12□□□□□ -1.27
MSH5O43196 SNORA40.6-201ENST00000391153 128 ntBASIC7.12□□□□□ -1.27
MSH5O43196 RNU6-1186P-201ENST00000410429 97 ntBASIC7.12□□□□□ -1.27
MSH5O43196 AL049830.1-201ENST00000468034 425 ntBASIC7.12□□□□□ -1.27
MSH5O43196 VWA8P1-201ENST00000510889 176 ntBASIC7.12□□□□□ -1.27
MSH5O43196 AC090821.2-201ENST00000523552 176 ntBASIC7.12□□□□□ -1.27
MSH5O43196 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC7.12□□□□□ -1.27
MSH5O43196 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC7.12□□□□□ -1.27
MSH5O43196 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC7.12□□□□□ -1.27
MSH5O43196 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MSH5O43196 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC7.12□□□□□ -1.27
MSH5O43196 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
MSH5O43196 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
MSH5O43196 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
MSH5O43196 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC7.12□□□□□ -1.27
MSH5O43196 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
MSH5O43196 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
MSH5O43196 HSPE1P26-201ENST00000405341 275 ntBASIC7.11□□□□□ -1.27
MSH5O43196 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC7.11□□□□□ -1.27
MSH5O43196 AC012493.2-201ENST00000595083 291 ntBASIC7.11□□□□□ -1.27
MSH5O43196 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
MSH5O43196 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
MSH5O43196 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
MSH5O43196 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC7.11□□□□□ -1.27
MSH5O43196 Z95114.1-201ENST00000624264 14574 ntBASIC7.11□□□□□ -1.27
MSH5O43196 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
MSH5O43196 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC7.11□□□□□ -1.27
MSH5O43196 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
MSH5O43196 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
MSH5O43196 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
MSH5O43196 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC7.1□□□□□ -1.27
MSH5O43196 SNORD68-201ENST00000363214 84 ntBASIC7.1□□□□□ -1.27
MSH5O43196 RNA5SP487-201ENST00000410186 122 ntBASIC7.1□□□□□ -1.27
MSH5O43196 SEM1P1-201ENST00000506694 209 ntBASIC7.1□□□□□ -1.27
MSH5O43196 RNU6-941P-201ENST00000516346 108 ntBASIC7.1□□□□□ -1.27
MSH5O43196 HMGB1P40-201ENST00000525121 540 ntBASIC7.1□□□□□ -1.27
MSH5O43196 MIR4472-2-201ENST00000582069 67 ntBASIC7.1□□□□□ -1.27
MSH5O43196 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
MSH5O43196 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
MSH5O43196 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
MSH5O43196 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
MSH5O43196 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC7.1□□□□□ -1.27
MSH5O43196 AC006504.1-201ENST00000562493 3666 ntBASIC7.09□□□□□ -1.27
MSH5O43196 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
MSH5O43196 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC7.09□□□□□ -1.27
MSH5O43196 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC7.09□□□□□ -1.27
MSH5O43196 RNU6-1216P-201ENST00000362590 107 ntBASIC7.09□□□□□ -1.27
MSH5O43196 RNA5SP502-201ENST00000362694 119 ntBASIC7.09□□□□□ -1.27
MSH5O43196 snoU2-30.1-201ENST00000365012 70 ntBASIC7.09□□□□□ -1.27
MSH5O43196 RNU6-748P-201ENST00000384648 107 ntBASIC7.09□□□□□ -1.27
MSH5O43196 AC009963.2-201ENST00000453431 138 ntBASIC7.09□□□□□ -1.27
MSH5O43196 AC106707.2-201ENST00000484182 374 ntBASIC7.09□□□□□ -1.27
MSH5O43196 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.09□□□□□ -1.27
MSH5O43196 RN7SKP18-201ENST00000516005 275 ntBASIC7.09□□□□□ -1.27
MSH5O43196 IGLV3-24-201ENST00000517477 197 ntBASIC7.09□□□□□ -1.27
MSH5O43196 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.09□□□□□ -1.27
MSH5O43196 AC040958.1-201ENST00000561102 201 ntBASIC7.09□□□□□ -1.27
MSH5O43196 AL109933.3-201ENST00000619095 188 ntBASIC7.09□□□□□ -1.27
MSH5O43196 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC7.09□□□□□ -1.27
MSH5O43196 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC7.09□□□□□ -1.27
MSH5O43196 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7.09□□□□□ -1.27
MSH5O43196 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
MSH5O43196 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MSH5O43196 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
MSH5O43196 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MSH5O43196 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MSH5O43196 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MSH5O43196 MIR133B-201ENST00000362210 119 ntBASIC7.08□□□□□ -1.28
MSH5O43196 RNU6-283P-201ENST00000364788 107 ntBASIC7.08□□□□□ -1.28
MSH5O43196 SNORD31B-201ENST00000364977 69 ntBASIC7.08□□□□□ -1.28
MSH5O43196 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC7.08□□□□□ -1.28
MSH5O43196 RN7SL481P-201ENST00000477764 299 ntBASIC7.08□□□□□ -1.28
MSH5O43196 AC025554.1-201ENST00000505641 188 ntBASIC7.08□□□□□ -1.28
MSH5O43196 RN7SKP276-201ENST00000516242 268 ntBASIC7.08□□□□□ -1.28
MSH5O43196 IGHVIII-2-1-201ENST00000518843 291 ntBASIC7.08□□□□□ -1.28
MSH5O43196 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MSH5O43196 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MSH5O43196 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
MSH5O43196 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MSH5O43196 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MSH5O43196 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MSH5O43196 RNA5SP123-201ENST00000363244 119 ntBASIC7.07□□□□□ -1.28
MSH5O43196 RNU6-146P-201ENST00000384602 108 ntBASIC7.07□□□□□ -1.28
MSH5O43196 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC7.07□□□□□ -1.28
MSH5O43196 RPS15AP28-201ENST00000435088 386 ntBASIC7.07□□□□□ -1.28
MSH5O43196 NIP7P2-201ENST00000485801 544 ntBASIC7.07□□□□□ -1.28
MSH5O43196 RN7SL290P-201ENST00000578661 300 ntBASIC7.07□□□□□ -1.28
MSH5O43196 AL360270.2-201ENST00000562952 5985 ntBASIC7.07□□□□□ -1.28
MSH5O43196 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC7.07□□□□□ -1.28
MSH5O43196 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
MSH5O43196 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MSH5O43196 LCMT1-AS2-202ENST00000565214 5666 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms