Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RNA5SP201-201ENST00000410316 124 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 HMGN1P14-201ENST00000412459 517 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 AL161935.2-201ENST00000414627 60 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 AL445305.1-201ENST00000432577 575 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.85□□□□□ -2.27
UBFD1O14562 USP9YP12-201ENST00000450481 570 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 AL162395.1-201ENST00000457882 422 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 MTND3P3-201ENST00000505004 126 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 AC079140.2-201ENST00000506193 142 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.85□□□□□ -2.27
UBFD1O14562 AC091874.1-201ENST00000511402 339 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 RNU6-1178P-201ENST00000516674 107 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.85□□□□□ -2.27
UBFD1O14562 AC090572.1-201ENST00000519251 160 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.85□□□□□ -2.27
UBFD1O14562 AC022878.1-201ENST00000530684 149 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 ELOCP32-201ENST00000548625 324 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 CYP3A52P-201ENST00000563326 91 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 VN1R107P-201ENST00000601784 209 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 AC078795.3-201ENST00000602913 472 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 AL590229.1-201ENST00000603497 542 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 AC107304.1-201ENST00000604229 296 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 TUSC7.1-201ENST00000610969 165 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.85□□□□□ -2.27
UBFD1O14562 AC022306.3-201ENST00000619930 550 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 AL450472.1-202ENST00000637286 180 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
UBFD1O14562 AC010615.1-201ENST00000594254 1764 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
UBFD1O14562 AL159152.1-201ENST00000635019 2587 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 RNU6-438P-201ENST00000365561 103 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 SNORA70.7-201ENST00000384159 133 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 RNU6-378P-201ENST00000384324 107 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 RNU6-331P-201ENST00000384724 107 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 MIR520A-201ENST00000384862 85 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 MRPL35P1-201ENST00000404272 572 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 RNU6-1245P-201ENST00000411130 106 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.84□□□□□ -2.27
UBFD1O14562 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.84□□□□□ -2.27
UBFD1O14562 RNU7-14P-201ENST00000459331 62 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.84□□□□□ -2.27
UBFD1O14562 SUMO2P18-201ENST00000518873 252 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 CBX3P8-201ENST00000532412 525 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.84□□□□□ -2.27
UBFD1O14562 AC090115.3-201ENST00000553218 849 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 AC015688.6-201ENST00000577737 104 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 FAM71BP1-201ENST00000604431 523 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 AL020996.3-201ENST00000606617 222 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 MIR3976-201ENST00000606807 139 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 PCGEM1.1-201ENST00000613431 131 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.84□□□□□ -2.27
UBFD1O14562 RNU6-1141P-201ENST00000364520 107 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 SNORA36A-201ENST00000384221 132 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
UBFD1O14562 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.83□□□□□ -2.28
UBFD1O14562 ATP5J2P3-201ENST00000451550 258 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.83□□□□□ -2.28
UBFD1O14562 AC010531.2-201ENST00000465012 153 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.83□□□□□ -2.28
UBFD1O14562 AC104136.1-201ENST00000512969 394 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 RNU6-311P-201ENST00000516224 102 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
UBFD1O14562 MRPS36P3-201ENST00000519284 130 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 AC023050.3-201ENST00000541142 333 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.83□□□□□ -2.28
UBFD1O14562 MIR3136-201ENST00000583498 78 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 AL355802.3-201ENST00000607571 545 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 AL133173.2-201ENST00000614270 90 ntBASIC0.83□□□□□ -2.28
UBFD1O14562 U3.4-201ENST00000363352 213 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 Y_RNA.205-201ENST00000364128 113 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 SNORA63D-201ENST00000364359 132 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 Y_RNA.367-201ENST00000365544 101 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 Y_RNA.393-201ENST00000383936 102 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 RNY1P4-201ENST00000384595 115 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 MIR194-1-201ENST00000384892 85 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 MIR216A-201ENST00000385063 110 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 AL117342.1-201ENST00000404861 406 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 RNU2-7P-201ENST00000410794 178 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 RNU6-387P-201ENST00000411331 105 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 RNU6-195P-201ENST00000411352 109 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.82□□□□□ -2.28
UBFD1O14562 HIGD1AP15-201ENST00000416198 280 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.82□□□□□ -2.28
UBFD1O14562 AL593851.1-201ENST00000426171 157 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 AC013470.1-201ENST00000453438 462 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 AC007547.1-201ENST00000462177 490 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 MTCO2P6-201ENST00000463134 685 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 RPL30P7-201ENST00000479312 323 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 RNU6-1041P-201ENST00000516254 102 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.82□□□□□ -2.28
UBFD1O14562 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.82□□□□□ -2.28
UBFD1O14562 MIR3923-201ENST00000579521 83 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 MIR3937-201ENST00000580135 106 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms