Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.95□□□□□ -1.78
SOX1O00570 AL137790.1-201ENST00000634283 177 ntBASIC3.95□□□□□ -1.78
SOX1O00570 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SOX1O00570 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SOX1O00570 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SOX1O00570 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.94□□□□□ -1.78
SOX1O00570 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX1O00570 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX1O00570 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX1O00570 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX1O00570 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SOX1O00570 RNU6-151P-201ENST00000364158 107 ntBASIC3.94□□□□□ -1.78
SOX1O00570 RNU6-239P-201ENST00000390990 99 ntBASIC3.94□□□□□ -1.78
SOX1O00570 U3.40-201ENST00000408706 208 ntBASIC3.94□□□□□ -1.78
SOX1O00570 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.94□□□□□ -1.78
SOX1O00570 AC107083.1-201ENST00000439643 279 ntBASIC3.94□□□□□ -1.78
SOX1O00570 AC093663.1-201ENST00000497190 394 ntBASIC3.94□□□□□ -1.78
SOX1O00570 Y_RNA.797-201ENST00000515977 94 ntBASIC3.94□□□□□ -1.78
SOX1O00570 RNU2-12P-201ENST00000517216 168 ntBASIC3.94□□□□□ -1.78
SOX1O00570 AP004242.1-201ENST00000533701 349 ntBASIC3.94□□□□□ -1.78
SOX1O00570 HIGD1AP1-201ENST00000550979 275 ntBASIC3.94□□□□□ -1.78
SOX1O00570 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.94□□□□□ -1.78
SOX1O00570 AC105137.2-201ENST00000569073 466 ntBASIC3.94□□□□□ -1.78
SOX1O00570 MIR4276-201ENST00000584832 70 ntBASIC3.94□□□□□ -1.78
SOX1O00570 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.94□□□□□ -1.78
SOX1O00570 AL078604.3-201ENST00000615580 211 ntBASIC3.94□□□□□ -1.78
SOX1O00570 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX1O00570 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX1O00570 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX1O00570 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SOX1O00570 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
SOX1O00570 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX1O00570 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX1O00570 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX1O00570 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX1O00570 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX1O00570 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SOX1O00570 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX1O00570 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX1O00570 RNU6-324P-201ENST00000363957 106 ntBASIC3.93□□□□□ -1.78
SOX1O00570 RNU6-275P-201ENST00000364910 107 ntBASIC3.93□□□□□ -1.78
SOX1O00570 MIR708-201ENST00000390708 88 ntBASIC3.93□□□□□ -1.78
SOX1O00570 RNU6-763P-201ENST00000390865 106 ntBASIC3.93□□□□□ -1.78
SOX1O00570 CBX3P9-201ENST00000402326 552 ntBASIC3.93□□□□□ -1.78
SOX1O00570 Y_RNA.629-201ENST00000411368 105 ntBASIC3.93□□□□□ -1.78
SOX1O00570 EBAG9P1-201ENST00000418955 543 ntBASIC3.93□□□□□ -1.78
SOX1O00570 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX1O00570 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX1O00570 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX1O00570 U8.19-201ENST00000459095 133 ntBASIC3.93□□□□□ -1.78
SOX1O00570 YWHAEP4-201ENST00000505390 198 ntBASIC3.93□□□□□ -1.78
SOX1O00570 RNU5F-2P-201ENST00000516066 82 ntBASIC3.93□□□□□ -1.78
SOX1O00570 RNU6-426P-201ENST00000516464 97 ntBASIC3.93□□□□□ -1.78
SOX1O00570 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX1O00570 SNORA62.6-201ENST00000606322 83 ntBASIC3.93□□□□□ -1.78
SOX1O00570 AL365222.1-201ENST00000614661 98 ntBASIC3.93□□□□□ -1.78
SOX1O00570 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX1O00570 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX1O00570 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX1O00570 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SOX1O00570 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SOX1O00570 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.92□□□□□ -1.78
SOX1O00570 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.92□□□□□ -1.78
SOX1O00570 AL133412.1-201ENST00000380194 2992 ntBASIC3.92□□□□□ -1.78
SOX1O00570 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SOX1O00570 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SOX1O00570 RNU1-15P-201ENST00000353977 144 ntBASIC3.92□□□□□ -1.78
SOX1O00570 RNU6-1264P-201ENST00000383891 107 ntBASIC3.92□□□□□ -1.78
SOX1O00570 SNORA1.3-201ENST00000384676 136 ntBASIC3.92□□□□□ -1.78
SOX1O00570 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.92□□□□□ -1.78
SOX1O00570 YPEL5P1-201ENST00000419731 367 ntBASIC3.92□□□□□ -1.78
SOX1O00570 CR769767.1-201ENST00000436337 346 ntBASIC3.92□□□□□ -1.78
SOX1O00570 AL161651.1-201ENST00000440882 223 ntBASIC3.92□□□□□ -1.78
SOX1O00570 AC103975.1-201ENST00000482506 483 ntBASIC3.92□□□□□ -1.78
SOX1O00570 RPS4XP13-201ENST00000483219 789 ntBASIC3.92□□□□□ -1.78
SOX1O00570 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.92□□□□□ -1.78
SOX1O00570 RNU7-121P-201ENST00000516604 62 ntBASIC3.92□□□□□ -1.78
SOX1O00570 AC136628.3-201ENST00000521868 290 ntBASIC3.92□□□□□ -1.78
SOX1O00570 AC100767.1-201ENST00000528178 123 ntBASIC3.92□□□□□ -1.78
SOX1O00570 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.92□□□□□ -1.78
SOX1O00570 MIR4769-201ENST00000584126 77 ntBASIC3.92□□□□□ -1.78
SOX1O00570 AL110115.1-201ENST00000614396 364 ntBASIC3.92□□□□□ -1.78
SOX1O00570 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.92□□□□□ -1.78
SOX1O00570 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.92□□□□□ -1.78
SOX1O00570 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.92□□□□□ -1.78
SOX1O00570 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SOX1O00570 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SOX1O00570 CUL1P1-201ENST00000509510 2425 ntBASIC3.92□□□□□ -1.78
SOX1O00570 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SOX1O00570 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.91□□□□□ -1.78
SOX1O00570 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SOX1O00570 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SOX1O00570 RNU6-257P-201ENST00000410238 98 ntBASIC3.91□□□□□ -1.78
SOX1O00570 AC008267.6-201ENST00000441664 139 ntBASIC3.91□□□□□ -1.78
SOX1O00570 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.91□□□□□ -1.78
SOX1O00570 RAC1P2-201ENST00000511164 579 ntBASIC3.91□□□□□ -1.78
SOX1O00570 RNU6-107P-201ENST00000516643 102 ntBASIC3.91□□□□□ -1.78
SOX1O00570 MIR548X2-201ENST00000579776 100 ntBASIC3.91□□□□□ -1.78
SOX1O00570 AC025946.2-201ENST00000603398 234 ntBASIC3.91□□□□□ -1.78
SOX1O00570 MIR7851-201ENST00000610611 160 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms