Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFXAPO00287 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RFXAPO00287 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFXAPO00287 Y_RNA.23-201ENST00000362496 106 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 SNORA63.4-201ENST00000362763 126 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 RNU6-942P-201ENST00000363002 107 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 RN7SKP111-201ENST00000410349 271 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 RNA5SP31-201ENST00000411144 127 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 RAB28P5-201ENST00000427490 651 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.56□□□□□ -1.84
RFXAPO00287 AL137159.1-201ENST00000452808 512 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 SNRPGP7-201ENST00000469016 106 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 AP002001.1-203ENST00000534002 267 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 AC112693.2-201ENST00000556538 232 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 MED28P6-201ENST00000558776 231 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.56□□□□□ -1.84
RFXAPO00287 U6.99-201ENST00000637524 83 ntBASIC3.56□□□□□ -1.84
RFXAPO00287 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFXAPO00287 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFXAPO00287 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFXAPO00287 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
RFXAPO00287 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.56□□□□□ -1.84
RFXAPO00287 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFXAPO00287 MAPK10-373ENST00000641983 6772 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 CUL1P1-201ENST00000509510 2425 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RFXAPO00287 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
RFXAPO00287 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RFXAPO00287 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFXAPO00287 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.55□□□□□ -1.84
RFXAPO00287 Y_RNA.75-201ENST00000362927 97 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 RNU4-11P-201ENST00000365287 132 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 RNU6-1199P-201ENST00000411249 104 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.55□□□□□ -1.84
RFXAPO00287 AC005042.3-201ENST00000453230 174 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 AP000705.1-201ENST00000454567 350 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 RN7SL863P-201ENST00000462370 296 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 AC084357.1-201ENST00000473404 255 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.55□□□□□ -1.84
RFXAPO00287 AC008885.1-201ENST00000514930 301 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 RNU6-579P-201ENST00000516879 102 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.55□□□□□ -1.84
RFXAPO00287 RNVU1-4-201ENST00000612985 164 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 AC068831.7-201ENST00000616954 363 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 SCARNA4-202ENST00000625402 129 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFXAPO00287 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFXAPO00287 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFXAPO00287 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
RFXAPO00287 TNPO1P3-201ENST00000436471 2662 ntBASIC3.55□□□□□ -1.84
RFXAPO00287 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
RFXAPO00287 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFXAPO00287 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFXAPO00287 AC092593.1-201ENST00000515413 1815 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFXAPO00287 AC093908.1-201ENST00000623125 8092 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.54□□□□□ -1.84
RFXAPO00287 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.54□□□□□ -1.84
RFXAPO00287 RNU1-18P-201ENST00000363062 164 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 RNU6-873P-201ENST00000363833 107 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 RNU6-312P-201ENST00000364629 107 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 RNU6-898P-201ENST00000365627 104 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 SNORD116-14-201ENST00000383894 92 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 SNORD116-17-201ENST00000383929 92 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 SNORD116-15-201ENST00000384445 92 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 SNORD116-20-201ENST00000384529 92 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 SNORD116-19-201ENST00000384729 92 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 MIR518D-201ENST00000385014 87 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 SNORA40-201ENST00000388090 126 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 MIR888-201ENST00000401186 77 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 Z98941.1-201ENST00000407764 100 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 RNU2-68P-201ENST00000410878 191 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 AL390729.2-201ENST00000416137 156 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.54□□□□□ -1.84
RFXAPO00287 MLLT10P2-201ENST00000506434 249 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 RNU4-60P-201ENST00000517239 135 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RFXAPO00287 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.54□□□□□ -1.84
RFXAPO00287 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.54□□□□□ -1.84
RFXAPO00287 MIR548X2-201ENST00000579776 100 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 AL359881.1-201ENST00000602916 267 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 uc_338.32-201ENST00000615087 172 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 U7.8-201ENST00000619968 63 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 AC018692.3-201ENST00000623929 123 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 AC091932.3-201ENST00000624223 323 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 AC008873.1-201ENST00000625051 138 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.54□□□□□ -1.84
RFXAPO00287 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RFXAPO00287 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.54□□□□□ -1.84
RFXAPO00287 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFXAPO00287 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFXAPO00287 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RFXAPO00287 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.54□□□□□ -1.84
RFXAPO00287 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.54□□□□□ -1.84
RFXAPO00287 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFXAPO00287 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFXAPO00287 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RFXAPO00287 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFXAPO00287 AC008568.2-201ENST00000623862 2313 ntBASIC3.53□□□□□ -1.84
RFXAPO00287 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms