Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC103810.1-201ENST00000579873 453 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 AC026241.1-201ENST00000517873 2142 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 AC096638.1-201ENST00000444678 216 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 FCF1P4-201ENST00000448326 183 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 MTCO3P8-201ENST00000453691 755 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 snoU13.6-201ENST00000458785 104 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 U8.22-201ENST00000459141 133 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 RNU7-170P-201ENST00000459303 61 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 RNU2-53P-201ENST00000516257 147 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 RNU6-579P-201ENST00000516879 102 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 RNU6-58P-201ENST00000517143 103 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 AC034114.1-201ENST00000520293 285 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 AL021368.2-201ENST00000606125 5352 ntBASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC85CA6NKD9 MAPK10-373ENST00000641983 6772 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 RNU6-222P-201ENST00000362438 107 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 RNU6-450P-201ENST00000364654 107 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 SNORA7.4-201ENST00000384249 137 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 MIR10B-201ENST00000385011 110 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 RN7SKP220-201ENST00000410611 288 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 AL159169.1-201ENST00000421119 127 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 RNU7-87P-201ENST00000459343 62 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 RN7SL594P-201ENST00000470590 287 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 AC010655.3-201ENST00000478818 450 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 RPS29P21-201ENST00000496272 170 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 MIR2114-201ENST00000516645 80 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 AC027176.1-201ENST00000560204 514 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 AC020914.4-201ENST00000597690 277 ntBASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC85CA6NKD9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.59□□□□□ -1.84
CCDC85CA6NKD9 BX322639.1-202ENST00000423987 2213 ntBASIC3.59□□□□□ -1.84
CCDC85CA6NKD9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC85CA6NKD9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.84
CCDC85CA6NKD9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 MFSD8-233ENST00000641482 4860 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 RNU4-15P-201ENST00000362613 141 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 RNU1-76P-201ENST00000362903 159 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 RNU6-1309P-201ENST00000363305 108 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 AL138878.1-201ENST00000405131 347 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 MIR1289-2-201ENST00000408360 111 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 RNU2-52P-201ENST00000410680 190 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 BX679664.1-201ENST00000434429 253 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 MTCO2P24-201ENST00000515611 426 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 AL390123.1-201ENST00000603216 237 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 AC012603.1-201ENST00000606424 528 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 AC046143.2-201ENST00000609789 160 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 PCGEM1.1-201ENST00000613431 131 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 MIR7157-201ENST00000635801 60 ntBASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC85CA6NKD9 RNU6-1301P-201ENST00000362724 104 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 Y_RNA.152-201ENST00000363578 100 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 U3.39-201ENST00000408569 239 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 AL356968.1-201ENST00000416622 474 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 SDAD1P3-201ENST00000427380 333 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 MTCYBP9-201ENST00000431021 303 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 RPL31P61-201ENST00000496160 376 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 AC025554.1-201ENST00000505641 188 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 AC010620.2-201ENST00000600135 313 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 RPS29P30-201ENST00000600975 111 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 AL121655.1-201ENST00000605811 308 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 AC010205.1-201ENST00000616668 449 ntBASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC85CA6NKD9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC85CA6NKD9 Y_RNA.144-201ENST00000363521 113 ntBASIC3.56□□□□□ -1.84
CCDC85CA6NKD9 RNU5F-3P-201ENST00000363767 117 ntBASIC3.56□□□□□ -1.84
CCDC85CA6NKD9 SNORA51.11-201ENST00000384442 131 ntBASIC3.56□□□□□ -1.84
CCDC85CA6NKD9 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms