Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 RNY4P34-201ENST00000364779 95 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 AL591704.2-201ENST00000421658 181 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 RPS29P29-201ENST00000456396 171 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 snoU13.27-201ENST00000459278 104 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 GMFBP1-201ENST00000467831 427 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 RPS23P5-201ENST00000495419 428 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 AC008628.2-201ENST00000502605 298 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 AC109446.2-201ENST00000567872 497 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 AP005136.1-201ENST00000579765 429 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 AP001836.1-201ENST00000604675 523 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 AC016727.1-205ENST00000605437 569 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 AC016597.2-201ENST00000613256 341 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 AC008250.2-201ENST00000615261 205 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 AL157834.3-201ENST00000615543 103 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 AL603839.4-201ENST00000624658 1005 ntBASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
RBFOX3A6NFN3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 SNORA7.1-201ENST00000363750 139 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 SNORA25.8-201ENST00000364831 128 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 SNORA22-201ENST00000383907 134 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 SNORA22C-201ENST00000384614 134 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 OR2A41P-201ENST00000473586 105 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 AK3P2-201ENST00000507976 429 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 AC067942.3-201ENST00000512025 362 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 AC090517.1-201ENST00000569307 266 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 MIR4703-201ENST00000577728 79 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 AL355802.3-201ENST00000607571 545 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 AC006566.1-201ENST00000608943 513 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 SNORA43.4-201ENST00000629559 138 ntBASIC0.94□□□□□ -2.26
RBFOX3A6NFN3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AL391987.6-201ENST00000305671 199 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 RNA5SP327-201ENST00000362494 101 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 Y_RNA.132-201ENST00000363421 102 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 RNU6-827P-201ENST00000365553 106 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 SNORA70.7-201ENST00000384159 133 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 Y_RNA.504-201ENST00000384481 104 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 RNU6-1127P-201ENST00000384580 107 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 SNORA16.2-201ENST00000390991 127 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 SNORD70.1-201ENST00000391007 85 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 RPL37P10-201ENST00000412884 288 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC011233.1-201ENST00000422812 283 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC092473.1-201ENST00000441098 221 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AL031274.1-201ENST00000450334 232 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 RNU7-95P-201ENST00000459222 64 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC091874.1-201ENST00000511402 339 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 RNU6-1041P-201ENST00000516254 102 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 RNU2-34P-201ENST00000516534 121 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC090115.3-201ENST00000553218 849 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC103996.1-201ENST00000555468 102 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 CYP3A52P-201ENST00000563326 91 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 TMF1P1-201ENST00000576058 373 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 MIR3941-201ENST00000582572 103 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 MIR548AB-201ENST00000584917 84 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 RSL24D1P11-201ENST00000591045 491 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC064872.1-201ENST00000604823 1072 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC002044.1-201ENST00000606707 158 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 snoU13.31-201ENST00000607291 104 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 AC008147.4-201ENST00000617570 1204 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.93□□□□□ -2.26
RBFOX3A6NFN3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 RNU6-266P-201ENST00000364225 107 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 RNU4-48P-201ENST00000365559 182 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 RNU6-877P-201ENST00000383868 107 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 MIR1-2-201ENST00000384961 85 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 MIR208B-201ENST00000401172 77 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AP000275.1-201ENST00000411943 390 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AP1B1P2-201ENST00000416196 106 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 USP9YP28-201ENST00000435142 589 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 RPS29P15-201ENST00000458329 171 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AL163973.1-201ENST00000484753 577 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AL133373.1-201ENST00000497098 94 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 RNU6-1053P-201ENST00000515930 101 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 RNU6-1129P-201ENST00000515964 104 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AC106038.2-201ENST00000520706 568 ntBASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.92□□□□□ -2.26
RBFOX3A6NFN3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms