Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.34□□□□□ -2.19
SMCO2A6NFE2 AC060788.1-201ENST00000521318 469 ntBASIC1.34□□□□□ -2.19
SMCO2A6NFE2 HSPE1P4-201ENST00000550617 308 ntBASIC1.34□□□□□ -2.19
SMCO2A6NFE2 EIF4A1P12-201ENST00000551910 141 ntBASIC1.34□□□□□ -2.19
SMCO2A6NFE2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.34□□□□□ -2.19
SMCO2A6NFE2 AC109446.1-201ENST00000566172 220 ntBASIC1.34□□□□□ -2.19
SMCO2A6NFE2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.34□□□□□ -2.19
SMCO2A6NFE2 AP001485.1-201ENST00000604799 199 ntBASIC1.34□□□□□ -2.19
SMCO2A6NFE2 RPL17P51-201ENST00000605218 238 ntBASIC1.34□□□□□ -2.19
SMCO2A6NFE2 AC002044.1-201ENST00000606707 158 ntBASIC1.34□□□□□ -2.19
SMCO2A6NFE2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SMCO2A6NFE2 SNORA43.4-201ENST00000629559 138 ntBASIC1.34□□□□□ -2.19
SMCO2A6NFE2 RNU6-181P-201ENST00000363225 107 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 RNU6-271P-201ENST00000363858 105 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 RNU6-266P-201ENST00000364225 107 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 RNU6-392P-201ENST00000364926 101 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 RNU2-29P-201ENST00000410423 189 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 RPL21P111-201ENST00000418453 477 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AC015922.2-201ENST00000435593 184 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AC099677.2-201ENST00000436385 175 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 SCARNA18-201ENST00000459004 134 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AC008628.2-201ENST00000502605 298 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AC016632.1-201ENST00000503994 196 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 RNU6-445P-201ENST00000516949 107 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AP001836.1-201ENST00000604675 523 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AC009994.1-201ENST00000606889 253 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 AC007494.3-201ENST00000624660 743 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SMCO2A6NFE2 MTND4P14-201ENST00000435799 1354 ntBASIC1.33□□□□□ -2.2
SMCO2A6NFE2 RNU4-56P-201ENST00000364700 142 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 MT-TH-201ENST00000387441 69 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.32□□□□□ -2.2
SMCO2A6NFE2 MTCO1P21-201ENST00000416634 589 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.32□□□□□ -2.2
SMCO2A6NFE2 AC132479.1-201ENST00000449160 144 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 RPS27AP8-201ENST00000452665 445 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 AL356010.1-201ENST00000456364 102 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.32□□□□□ -2.2
SMCO2A6NFE2 AC091874.1-201ENST00000511402 339 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 AC105417.1-201ENST00000514691 285 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 RNU6-1098P-201ENST00000516772 96 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 CYP4A27P-201ENST00000567218 190 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.32□□□□□ -2.2
SMCO2A6NFE2 Z98751.3-201ENST00000604447 521 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 Z84480.1-201ENST00000605131 311 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 AC136475.10-201ENST00000620253 385 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 AC091895.1-201ENST00000624494 256 ntBASIC1.32□□□□□ -2.2
SMCO2A6NFE2 RNU6-414P-201ENST00000363705 104 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 RNU6-827P-201ENST00000365553 106 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 RNU6-438P-201ENST00000365561 103 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 RNU6-378P-201ENST00000384324 107 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 RNU6-360P-201ENST00000390944 104 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 SNORA26.8-201ENST00000391306 124 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 MIR1267-201ENST00000408723 78 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 AP000275.1-201ENST00000411943 390 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.31□□□□□ -2.2
SMCO2A6NFE2 AL161935.2-201ENST00000414627 60 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 AC245047.4-201ENST00000433189 144 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.31□□□□□ -2.2
SMCO2A6NFE2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.31□□□□□ -2.2
SMCO2A6NFE2 RNU7-167P-201ENST00000459160 62 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 AP002963.1-201ENST00000530590 184 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 AL137161.1-201ENST00000532231 390 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 AC103996.1-201ENST00000555468 102 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 RSL24D1P11-201ENST00000591045 491 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 Z94722.1-201ENST00000604328 474 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 AL603755.1-201ENST00000619504 163 ntBASIC1.31□□□□□ -2.2
SMCO2A6NFE2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SMCO2A6NFE2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
SMCO2A6NFE2 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 RNU6-552P-201ENST00000362869 119 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 RNY3P10-201ENST00000384764 102 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 BX295541.1-201ENST00000417774 250 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.3□□□□□ -2.2
SMCO2A6NFE2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC002486.1-201ENST00000435098 391 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 JTBP1-201ENST00000441314 247 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.3□□□□□ -2.2
SMCO2A6NFE2 SNRPGP9-201ENST00000456025 225 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC099513.1-201ENST00000490423 301 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.3□□□□□ -2.2
SMCO2A6NFE2 HMGN1P13-201ENST00000505795 138 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC108078.1-201ENST00000508073 725 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 RNA5SP445-201ENST00000515889 115 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms