Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 HMGN1P30-201ENST00000589286 268 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 AC022432.1-201ENST00000595739 310 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 AC073539.2-201ENST00000597113 165 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 AC105148.1-201ENST00000604961 409 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 AL157786.1-207ENST00000627771 695 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 AC092268.1-201ENST00000342691 405 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-931P-201ENST00000363850 107 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 Y_RNA.354-201ENST00000365448 111 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 SNORA24.1-201ENST00000384401 135 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 MIR92A1-201ENST00000385233 78 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AL590135.1-201ENST00000422215 156 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC019205.3-201ENST00000424573 156 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC010975.2-201ENST00000427781 588 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC002429.1-201ENST00000437672 148 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 MTND3P1-201ENST00000441336 220 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC016700.2-201ENST00000446011 156 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 RNU7-14P-201ENST00000459331 62 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 RPS26P45-201ENST00000471748 340 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC015911.1-201ENST00000495111 156 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC016550.1-201ENST00000505348 785 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 MTND3P25-201ENST00000509243 135 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 SNORA31.4-201ENST00000516049 129 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-1041P-201ENST00000516254 102 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 RNU2-34P-201ENST00000516534 121 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 RNA5SP168-201ENST00000516642 112 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AP003168.1-201ENST00000530091 307 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC009994.1-201ENST00000606889 253 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC126177.8-201ENST00000618339 1015 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC009509.4-201ENST00000619202 509 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC136475.10-201ENST00000620253 385 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC097372.5-201ENST00000623665 376 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 AC106858.1-201ENST00000637497 429 ntBASIC0.47□□□□□ -2.33
TRAV3A0A0B4J244 RNU1-133P-201ENST00000364867 167 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-61P-201ENST00000365528 109 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 MIR558-201ENST00000384920 94 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 MIR489-201ENST00000384923 84 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 RPS29P13-201ENST00000402041 169 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-1245P-201ENST00000411130 106 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-387P-201ENST00000411331 105 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 AC063976.4-201ENST00000421971 163 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 AC137499.1-201ENST00000427602 88 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 MED13P1-201ENST00000428342 171 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 AL445305.1-201ENST00000432577 575 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 SNORD124-201ENST00000459577 104 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 PDCD5P2-201ENST00000507570 312 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 AC117522.1-201ENST00000509821 380 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 AC011406.1-201ENST00000512440 370 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 SNORD79.1-201ENST00000516069 84 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 AC008751.2-201ENST00000597885 980 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 MIR7111-201ENST00000619751 72 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 AL450472.1-202ENST00000637286 180 ntBASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
TRAV3A0A0B4J244 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 RNA5SP347-201ENST00000362445 119 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 RNU4-56P-201ENST00000364700 142 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 RNA5SP259-201ENST00000365541 109 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-692P-201ENST00000384496 107 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-1235P-201ENST00000384559 107 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-498P-201ENST00000459468 107 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 AC109479.2-201ENST00000517842 174 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 AL590705.4-201ENST00000532209 134 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 ZNF321P-202ENST00000550843 495 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 AC021506.2-201ENST00000612354 169 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 BX322639.1-202ENST00000423987 2213 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 MTND4P16-201ENST00000466108 1367 ntBASIC0.45□□□□□ -2.34
TRAV3A0A0B4J244 Y_RNA.112-201ENST00000363250 102 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-378P-201ENST00000384324 107 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-39P-201ENST00000384344 107 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-293P-201ENST00000411259 106 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 SNAP23P1-201ENST00000433229 246 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 MTCO3P18-201ENST00000440206 761 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 RAP1BP2-201ENST00000478270 544 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 AC104982.1-201ENST00000478775 574 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 RBBP4P6-201ENST00000508098 202 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 MTCO3P7-201ENST00000510008 774 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 AC074344.1-201ENST00000512823 224 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 SNORA31.2-201ENST00000516019 134 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 RNU5F-4P-201ENST00000516581 114 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms