Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.98□□□□□ -2.25
USH1CQ9Y6N9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.98□□□□□ -2.25
USH1CQ9Y6N9 AL451064.1-201ENST00000607718 471 ntBASIC0.98□□□□□ -2.25
USH1CQ9Y6N9 AC006927.3-201ENST00000638789 384 ntBASIC0.98□□□□□ -2.25
USH1CQ9Y6N9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.98□□□□□ -2.25
USH1CQ9Y6N9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 Y_RNA.116-201ENST00000363292 103 ntBASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 MIR518E-201ENST00000385252 88 ntBASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 AC034244.1-201ENST00000507687 207 ntBASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 AC109479.2-201ENST00000517842 174 ntBASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 AC005771.1-201ENST00000585581 349 ntBASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 AC112191.3-201ENST00000604371 277 ntBASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 AC009159.2-201ENST00000617603 606 ntBASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 U6.114-201ENST00000636407 96 ntBASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 AC007671.2-201ENST00000637344 619 ntBASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 AC027514.1-201ENST00000588561 1603 ntBASIC0.97□□□□□ -2.25
USH1CQ9Y6N9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 U3.4-201ENST00000363352 213 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 SNORA63D-201ENST00000364359 132 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 RNU6-1303P-201ENST00000364841 107 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 RNU6-1026P-201ENST00000384465 108 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 RNU2-8P-201ENST00000410727 190 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 MTCO2P8-201ENST00000412213 658 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 SSR1P2-201ENST00000415208 787 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 HIGD1AP15-201ENST00000416198 280 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AC098592.1-201ENST00000419352 333 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AC078809.1-201ENST00000427601 140 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 MTCO3P29-201ENST00000432119 779 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AC132479.1-201ENST00000449160 144 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 USP9YP12-201ENST00000450481 570 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AC010531.2-201ENST00000465012 153 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AL163195.1-201ENST00000496941 348 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 RNU6-1041P-201ENST00000516254 102 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 RNU6-1178P-201ENST00000516674 107 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AC023050.3-201ENST00000541142 333 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 MIR4452-201ENST00000583004 71 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 TUSC7.1-201ENST00000610969 165 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 PCGEM1.1-201ENST00000613431 131 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AC136475.10-201ENST00000620253 385 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 MIR8065-201ENST00000620577 100 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AC138649.3-201ENST00000622154 254 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 AC009033.1-201ENST00000624279 431 ntBASIC0.96□□□□□ -2.26
USH1CQ9Y6N9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 RNU6-1287P-201ENST00000362914 107 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 RNU1-22P-201ENST00000363334 158 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 RNU6-715P-201ENST00000365204 103 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 RNU5E-5P-201ENST00000365379 116 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 RNU6-1060P-201ENST00000384664 107 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 RNU6-550P-201ENST00000391057 101 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 RN7SKP61-201ENST00000410642 295 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 MTCO1P21-201ENST00000416634 589 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AC106883.1-201ENST00000418805 562 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 SNX2P2-201ENST00000424553 323 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AC007395.1-201ENST00000451333 677 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AC016925.1-201ENST00000458303 298 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 snoU13.27-201ENST00000459278 104 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AC087343.1-201ENST00000477341 475 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AL163973.1-201ENST00000484753 577 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AC022878.1-201ENST00000530684 149 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AC078795.3-201ENST00000602913 472 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AL391834.2-201ENST00000609982 546 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AC099654.5-201ENST00000636479 350 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AC099654.13-201ENST00000639774 207 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 AL391516.1-201ENST00000554380 2449 ntBASIC0.95□□□□□ -2.26
USH1CQ9Y6N9 Y_RNA.122-201ENST00000363331 96 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 SNORD32A-201ENST00000364805 84 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 RNU6-378P-201ENST00000384324 107 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 Y_RNA.508-201ENST00000384502 114 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 AL356583.2-201ENST00000426536 280 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 COX6CP14-201ENST00000469580 174 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 AL512310.8-201ENST00000550183 120 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 EIF4A1P12-201ENST00000551910 141 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 MTND1P8-201ENST00000571424 950 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 AC136443.5-201ENST00000603741 370 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 Z99289.3-201ENST00000605586 594 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 AC004492.1-201ENST00000607036 742 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 AL365434.2-201ENST00000607979 234 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 AL133173.2-201ENST00000614270 90 ntBASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
USH1CQ9Y6N9 MTND5P17-201ENST00000418405 1603 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AC092268.1-201ENST00000342691 405 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 RNU6-500P-201ENST00000362349 107 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 RNU6-552P-201ENST00000362869 119 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 Y_RNA.132-201ENST00000363421 102 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms