Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU7-143P-201ENST00000516781 65 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 AC115990.1-201ENST00000526957 301 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 CYP4A27P-201ENST00000567218 190 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 SNRPGP20-201ENST00000604477 205 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 MIR6076-201ENST00000617521 113 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 AC139713.2-215ENST00000641428 5037 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 RNA5SP399-201ENST00000364003 117 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 Y_RNA.415-201ENST00000384012 112 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 SNORA1.3-201ENST00000384676 136 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 U3.26-201ENST00000391236 204 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 RNU6-381P-201ENST00000391259 108 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 U3.40-201ENST00000408706 208 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 RNA5SP390-201ENST00000410191 113 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 RPL30P13-201ENST00000418873 348 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 EBAG9P1-201ENST00000418955 543 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 RNA5SP310-201ENST00000459084 116 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 AP001486.1-201ENST00000463339 476 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 UBE2DNL-203ENST00000474922 222 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 AC021739.1-201ENST00000559631 174 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 AL356575.1-201ENST00000603008 283 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 AC069294.1-201ENST00000608397 350 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 AC006111.3-201ENST00000622137 383 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 AC073308.1-201ENST00000623696 305 ntBASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.74□□□□□ -1.65
ZC3H4Q9UPT8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 RNU4-10P-201ENST00000364383 140 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 RNA5SP51-201ENST00000364750 119 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 MIR128-1-201ENST00000384921 82 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 AC004552.1-201ENST00000419089 348 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 RPS26P3-201ENST00000470205 348 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 AC090543.2-201ENST00000483963 348 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 AC004057.1-201ENST00000485827 348 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 RN7SL271P-201ENST00000487601 295 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 RPS26P15-201ENST00000488067 348 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 AC107027.2-201ENST00000512197 115 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 RN7SKP164-201ENST00000516138 266 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 RNU6-1333P-201ENST00000516162 93 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 CYP4A43P-201ENST00000568156 121 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 MIR4644-201ENST00000579929 84 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 MIR8057-201ENST00000620957 69 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 AC134026.1-201ENST00000623249 2239 ntBASIC4.73□□□□□ -1.65
ZC3H4Q9UPT8 RNU1-62P-201ENST00000362599 164 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RNU6-199P-201ENST00000362954 107 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RNU1-33P-201ENST00000364249 162 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RNA5SP205-201ENST00000364653 136 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RNU6-622P-201ENST00000384272 103 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 Y_RNA.510-201ENST00000384511 114 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 AC005300.1-201ENST00000428401 373 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RNU6-436P-201ENST00000516171 114 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 AC021269.2-201ENST00000532318 330 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 AC006199.1-201ENST00000548728 219 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 MIR4744-201ENST00000581563 82 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 SNORD35B-201ENST00000363660 87 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RNA5SP50-201ENST00000363731 107 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 Y_RNA.353-201ENST00000365440 108 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RNU6-1264P-201ENST00000383891 107 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 AL137159.1-201ENST00000452808 512 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RNU6-1211P-201ENST00000459179 105 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 AC114982.1-201ENST00000469402 321 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RPL30P14-201ENST00000482744 348 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 RNU2-12P-201ENST00000517216 168 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms