Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC016256.1-201ENST00000547971 354 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 AC007012.1-201ENST00000567192 175 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 FAM71BP1-201ENST00000604431 523 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 AL138963.2-201ENST00000605137 226 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 AC073346.2-201ENST00000624724 2058 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 SNORD35B-201ENST00000363660 87 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 SNORA5A-201ENST00000384111 134 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-1113P-201ENST00000384348 107 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 Y_RNA.549-201ENST00000384657 102 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 PTMAP5-201ENST00000393073 333 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 AL358075.3-201ENST00000426289 226 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 SNORD108-201ENST00000459332 71 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 RPL29P14-201ENST00000495837 428 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 RNA5SP490-201ENST00000517141 136 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 AC026421.1-201ENST00000519101 163 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 CYCSP23-201ENST00000519781 313 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 AC012468.1-201ENST00000604888 430 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 SNORD115-40-201ENST00000606510 82 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 AC096577.2-201ENST00000611455 153 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 MALAT1.1-201ENST00000618249 95 ntBASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDZRN3Q9UPQ7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 RNA5SP72-201ENST00000364442 117 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-1014P-201ENST00000383940 103 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-1310P-201ENST00000384153 107 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 SNORA72-201ENST00000384339 132 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 RPL21P17-201ENST00000397467 475 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 AC074117.2-201ENST00000417130 397 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 AL391219.1-201ENST00000422570 483 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 Y_RNA.690-201ENST00000516603 95 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-1198P-201ENST00000516904 67 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 GNRHR2P1-201ENST00000555315 631 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 MIR378D2-201ENST00000580636 98 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 AL161798.1-201ENST00000604630 131 ntBASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDZRN3Q9UPQ7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-1155P-201ENST00000363554 107 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-309P-201ENST00000364573 106 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 RPL23AP48-201ENST00000406913 488 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 Y_RNA.593-201ENST00000410292 98 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 RNU2-43P-201ENST00000410306 190 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 YPEL5P1-201ENST00000419731 367 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 AC008134.1-201ENST00000420943 193 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 GMPSP1-201ENST00000514075 579 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 SNORA74D-201ENST00000516404 141 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 RNU2-12P-201ENST00000517216 168 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 AC025627.2-201ENST00000576220 160 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 AL031274.2-201ENST00000599419 203 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 SNORA43.4-201ENST00000629559 138 ntBASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.03□□□□□ -1.6
PDZRN3Q9UPQ7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-1167P-201ENST00000363227 94 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-1125P-201ENST00000363601 107 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-324P-201ENST00000363957 106 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 RNA5SP125-201ENST00000364843 120 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-1134P-201ENST00000365156 101 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 MIR34A-201ENST00000385130 110 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-821P-201ENST00000390995 107 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-710P-201ENST00000410424 105 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 RN7SKP177-201ENST00000410567 355 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 AC096649.2-201ENST00000416186 393 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms