Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 AC009487.4-201ENST00000624969 3585 ntBASIC4.7□□□□□ -1.66
LHX6Q9UPM6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 RNU1-72P-201ENST00000362976 153 ntBASIC4.7□□□□□ -1.66
LHX6Q9UPM6 Y_RNA.242-201ENST00000364473 110 ntBASIC4.7□□□□□ -1.66
LHX6Q9UPM6 SNORA2.2-201ENST00000365473 135 ntBASIC4.7□□□□□ -1.66
LHX6Q9UPM6 RNU6-652P-201ENST00000365488 107 ntBASIC4.7□□□□□ -1.66
LHX6Q9UPM6 Y_RNA.410-201ENST00000383992 113 ntBASIC4.7□□□□□ -1.66
LHX6Q9UPM6 MIR577-201ENST00000385196 96 ntBASIC4.7□□□□□ -1.66
LHX6Q9UPM6 Y_RNA.620-201ENST00000411009 88 ntBASIC4.7□□□□□ -1.66
LHX6Q9UPM6 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 AC113410.1-201ENST00000505029 247 ntBASIC4.7□□□□□ -1.66
LHX6Q9UPM6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 SNORA31.9-201ENST00000516429 84 ntBASIC4.7□□□□□ -1.66
LHX6Q9UPM6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LHX6Q9UPM6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 RNU6-60P-201ENST00000364792 103 ntBASIC4.69□□□□□ -1.66
LHX6Q9UPM6 RNU1-57P-201ENST00000384491 166 ntBASIC4.69□□□□□ -1.66
LHX6Q9UPM6 MIR518F-201ENST00000384973 87 ntBASIC4.69□□□□□ -1.66
LHX6Q9UPM6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 RNU7-14P-201ENST00000459331 62 ntBASIC4.69□□□□□ -1.66
LHX6Q9UPM6 SNORD108-201ENST00000459332 71 ntBASIC4.69□□□□□ -1.66
LHX6Q9UPM6 RN7SL542P-201ENST00000467147 294 ntBASIC4.69□□□□□ -1.66
LHX6Q9UPM6 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 HMGN2P15-201ENST00000585707 270 ntBASIC4.69□□□□□ -1.66
LHX6Q9UPM6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 AL161756.2-201ENST00000604597 246 ntBASIC4.69□□□□□ -1.66
LHX6Q9UPM6 RNU1-30P-201ENST00000606575 163 ntBASIC4.69□□□□□ -1.66
LHX6Q9UPM6 AC006160.2-201ENST00000637708 154 ntBASIC4.69□□□□□ -1.66
LHX6Q9UPM6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LHX6Q9UPM6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.68□□□□□ -1.66
LHX6Q9UPM6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.68□□□□□ -1.66
LHX6Q9UPM6 SNORA7.2-201ENST00000364446 145 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 MIR483-201ENST00000385070 76 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 CRYBB2P1-203ENST00000415709 538 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 AL513477.1-202ENST00000417061 214 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 PHBP16-201ENST00000446318 950 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 AC016717.1-201ENST00000448918 286 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.68□□□□□ -1.66
LHX6Q9UPM6 RPS29P21-201ENST00000496272 170 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 RNU6-513P-201ENST00000516104 104 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 AC022655.2-201ENST00000577280 318 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 MIR4668-201ENST00000582284 70 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 MIR4305-201ENST00000583252 102 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 AC008507.4-201ENST00000585464 127 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 AC008739.2-201ENST00000597006 317 ntBASIC4.68□□□□□ -1.66
LHX6Q9UPM6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX6Q9UPM6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.68□□□□□ -1.66
LHX6Q9UPM6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX6Q9UPM6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LHX6Q9UPM6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX6Q9UPM6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.68□□□□□ -1.66
LHX6Q9UPM6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LHX6Q9UPM6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.67□□□□□ -1.66
LHX6Q9UPM6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LHX6Q9UPM6 Y_RNA.360-201ENST00000365512 102 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LHX6Q9UPM6 SNORA18-201ENST00000384416 132 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 RPS26P8-201ENST00000393490 348 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 AC007738.1-201ENST00000413892 348 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 RNU1-131P-201ENST00000458943 161 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 RNU7-70P-201ENST00000516941 66 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 RNU7-172P-201ENST00000517125 64 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 RNU1-45P-201ENST00000517191 141 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.67□□□□□ -1.66
LHX6Q9UPM6 TRAV8-5-201ENST00000537369 341 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 MIR548Z-201ENST00000584743 97 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 MIR3138-201ENST00000585238 82 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LHX6Q9UPM6 OR56B2P-202ENST00000641377 2453 ntBASIC4.67□□□□□ -1.66
LHX6Q9UPM6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
LHX6Q9UPM6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LHX6Q9UPM6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LHX6Q9UPM6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 MIR889-201ENST00000401280 79 ntBASIC4.66□□□□□ -1.66
LHX6Q9UPM6 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms