Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 RNU6-211P-201ENST00000384047 107 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 MIR518D-201ENST00000385014 87 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 Y_RNA.586-201ENST00000391146 98 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 TOMM22P1-201ENST00000418578 312 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 AC009237.8-201ENST00000445492 379 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 HMGB3P3-201ENST00000510526 400 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 RPL23AP94-201ENST00000512518 302 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 RNU5F-8P-201ENST00000515941 111 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 RNU6-1198P-201ENST00000516904 67 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 LINC00933-203ENST00000559812 219 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 AL133393.1-201ENST00000603277 287 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 YPEL5P2-201ENST00000605553 359 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 AC022441.3-201ENST00000605737 136 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 MIR486-1-201ENST00000612171 68 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 AL365222.1-201ENST00000614661 98 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 AC068831.7-201ENST00000616954 363 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 MIR6852-201ENST00000621699 66 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 snoU18.1-201ENST00000629629 71 ntBASIC3.6□□□□□ -1.83
MBD1Q9UIS9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MBD1Q9UIS9 AL109809.4-201ENST00000603520 2185 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD1Q9UIS9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MBD1Q9UIS9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
MBD1Q9UIS9 Y_RNA.215-201ENST00000364204 112 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 RNU6-898P-201ENST00000365627 104 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 Y_RNA.629-201ENST00000411368 105 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 IFNA11P-201ENST00000446352 526 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 U3.44-201ENST00000458938 192 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 RN7SL93P-201ENST00000463035 293 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD1Q9UIS9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD1Q9UIS9 MIR5571-201ENST00000577998 113 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD1Q9UIS9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 AL357075.2-201ENST00000614906 189 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.59□□□□□ -1.83
MBD1Q9UIS9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD1Q9UIS9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MBD1Q9UIS9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
MBD1Q9UIS9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
MBD1Q9UIS9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.59□□□□□ -1.84
MBD1Q9UIS9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
MBD1Q9UIS9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
MBD1Q9UIS9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.58□□□□□ -1.84
MBD1Q9UIS9 AC118273.1-201ENST00000525324 3006 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
MBD1Q9UIS9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.58□□□□□ -1.84
MBD1Q9UIS9 RNU1-18P-201ENST00000363062 164 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 RNU4-80P-201ENST00000363200 141 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 SNORD115-8-201ENST00000363856 82 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 RNU6-312P-201ENST00000364629 107 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 SNORD115-38-201ENST00000365037 82 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 RNU1-140P-201ENST00000365040 165 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 SNORD116-20-201ENST00000384529 92 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 RNU6-658P-201ENST00000384606 106 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 MIR186-201ENST00000384988 86 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 SNORA40.19-201ENST00000390846 128 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 U3.19-201ENST00000390893 196 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 SNORD17-201ENST00000390930 237 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD1Q9UIS9 AL358075.3-201ENST00000426289 226 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 AL512844.2-201ENST00000433990 593 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD1Q9UIS9 AC010095.1-201ENST00000443543 144 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 snoU13.4-201ENST00000458916 104 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD1Q9UIS9 RPL23AP14-201ENST00000468281 468 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 RNU6-191P-201ENST00000516295 94 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 RN7SKP209-201ENST00000516888 304 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD1Q9UIS9 MIR7851-201ENST00000610611 160 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MBD1Q9UIS9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
MBD1Q9UIS9 AC008568.2-201ENST00000623862 2313 ntBASIC3.58□□□□□ -1.84
MBD1Q9UIS9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
MBD1Q9UIS9 Y_RNA.7-201ENST00000362352 102 ntBASIC3.57□□□□□ -1.84
MBD1Q9UIS9 SNORA72.2-201ENST00000365028 127 ntBASIC3.57□□□□□ -1.84
MBD1Q9UIS9 RNU6-140P-201ENST00000384566 108 ntBASIC3.57□□□□□ -1.84
MBD1Q9UIS9 RNU1-89P-201ENST00000384592 164 ntBASIC3.57□□□□□ -1.84
MBD1Q9UIS9 SNORA48.5-201ENST00000391143 135 ntBASIC3.57□□□□□ -1.84
MBD1Q9UIS9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MBD1Q9UIS9 Y_RNA.595-201ENST00000410403 105 ntBASIC3.57□□□□□ -1.84
MBD1Q9UIS9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.57□□□□□ -1.84
MBD1Q9UIS9 GPM6BP3-201ENST00000442797 145 ntBASIC3.57□□□□□ -1.84
MBD1Q9UIS9 AC097462.2-201ENST00000504623 481 ntBASIC3.57□□□□□ -1.84
MBD1Q9UIS9 SNORA31.8-201ENST00000516327 108 ntBASIC3.57□□□□□ -1.84
MBD1Q9UIS9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms