Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 AC103810.1-201ENST00000579873 453 ntBASIC3.2□□□□□ -1.9
DNAJC28Q9NX36 AC124312.5-201ENST00000604451 268 ntBASIC3.2□□□□□ -1.9
DNAJC28Q9NX36 AC005520.5-201ENST00000613926 164 ntBASIC3.2□□□□□ -1.9
DNAJC28Q9NX36 SCARNA15.3-201ENST00000626315 122 ntBASIC3.2□□□□□ -1.9
DNAJC28Q9NX36 SCARNA4.1-201ENST00000628597 123 ntBASIC3.2□□□□□ -1.9
DNAJC28Q9NX36 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
DNAJC28Q9NX36 AL079305.1-201ENST00000623159 3008 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 RNU6-222P-201ENST00000362438 107 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 RNU6-486P-201ENST00000363116 107 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 RNU6-450P-201ENST00000364654 107 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 Y_RNA.380-201ENST00000365663 111 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 RNU1-139P-201ENST00000391307 165 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 RPL21P75-201ENST00000396599 483 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 RPL21P28-201ENST00000401418 483 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 CBX3P9-201ENST00000402326 552 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AL356057.3-201ENST00000402607 340 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AL590556.1-201ENST00000423231 483 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 EIF4EP4-201ENST00000424916 578 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AL358176.2-201ENST00000425769 204 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 USP9YP16-201ENST00000430287 407 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 USP9YP23-201ENST00000455085 407 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 U8.22-201ENST00000459141 133 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AP001486.1-201ENST00000463339 476 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 RPL21P39-201ENST00000463605 483 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AP000870.1-201ENST00000472927 406 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AL049873.1-201ENST00000480540 376 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 RPL23AP70-201ENST00000483361 460 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AC087190.1-201ENST00000484462 480 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AC107032.1-201ENST00000485945 480 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AC132942.1-201ENST00000486753 483 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AC093591.1-201ENST00000491435 481 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 RPL21P16-201ENST00000495531 483 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 MTND4LP22-201ENST00000508209 276 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AL442163.3-201ENST00000554110 156 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AL138963.2-201ENST00000605137 226 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 AL078596.1-201ENST00000624856 447 ntBASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DNAJC28Q9NX36 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 Y_RNA.153-201ENST00000363615 91 ntBASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 RNU6-541P-201ENST00000384709 110 ntBASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 MIR487A-201ENST00000385009 80 ntBASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 MICF-203ENST00000432679 129 ntBASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 MTCO3P8-201ENST00000453691 755 ntBASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 SNORA59A-201ENST00000459326 152 ntBASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 RNU6-1114P-201ENST00000516022 107 ntBASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 RNU6-1198P-201ENST00000516904 67 ntBASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 RNU6-58P-201ENST00000517143 103 ntBASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 AL117187.1-201ENST00000555482 181 ntBASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 MIR7515-201ENST00000637837 67 ntBASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DNAJC28Q9NX36 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 SNORA68.1-201ENST00000364537 132 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 RNU6-1105P-201ENST00000384774 107 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 MIR548F4-201ENST00000408515 105 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 MIR1252-201ENST00000408861 65 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 RNA5SP201-201ENST00000410316 124 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 RNU6-1328P-201ENST00000410938 106 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 HMGB3P2-201ENST00000411913 584 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 MTND3P2-201ENST00000438452 342 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 RPS3P1-201ENST00000456781 192 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 U8.20-201ENST00000459445 131 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 S100A11P2-201ENST00000467589 312 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 AC022080.3-201ENST00000544433 482 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 AC018692.3-201ENST00000623929 123 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 AC006386.2-201ENST00000624491 75 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 AC012005.1-201ENST00000624575 75 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 AC010329.5-201ENST00000623497 2174 ntBASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.17□□□□□ -1.9
DNAJC28Q9NX36 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DNAJC28Q9NX36 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
DNAJC28Q9NX36 Y_RNA.27-201ENST00000362540 103 ntBASIC3.16□□□□□ -1.9
DNAJC28Q9NX36 RNU4-15P-201ENST00000362613 141 ntBASIC3.16□□□□□ -1.9
DNAJC28Q9NX36 Y_RNA.133-201ENST00000363428 110 ntBASIC3.16□□□□□ -1.9
DNAJC28Q9NX36 RNU4-50P-201ENST00000364361 141 ntBASIC3.16□□□□□ -1.9
DNAJC28Q9NX36 SNORA51.11-201ENST00000384442 131 ntBASIC3.16□□□□□ -1.9
DNAJC28Q9NX36 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
DNAJC28Q9NX36 RNA5SP213-201ENST00000391031 106 ntBASIC3.16□□□□□ -1.9
DNAJC28Q9NX36 RNU6-159P-201ENST00000391080 106 ntBASIC3.16□□□□□ -1.9
DNAJC28Q9NX36 MIR208B-201ENST00000401172 77 ntBASIC3.16□□□□□ -1.9
DNAJC28Q9NX36 MIR1289-1-201ENST00000408836 144 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms