Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 RNU1-20P-201ENST00000363314 162 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 RNU6-647P-201ENST00000364243 107 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 U8.6-201ENST00000364939 135 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 RNU6-487P-201ENST00000365430 104 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 U3.26-201ENST00000391236 204 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 RNY4P29-201ENST00000410801 97 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 Y_RNA.617-201ENST00000410920 90 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 TOMM22P2-201ENST00000430735 237 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 MIR3136-201ENST00000583498 78 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 AL451007.1-201ENST00000595491 289 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 AL160290.3-201ENST00000604869 165 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 MIR6891-201ENST00000618788 93 ntBASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CUEDC1Q9NWM3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 MIR448-201ENST00000362131 111 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 RNU6-1164P-201ENST00000364428 107 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 Y_RNA.346-201ENST00000365385 112 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 MIR549A-201ENST00000385268 96 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 SNORA48.5-201ENST00000391143 135 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 AC005300.1-201ENST00000428401 373 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 AC069285.2-201ENST00000440210 275 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 SNORA70.12-201ENST00000516084 153 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 RNU6-344P-201ENST00000516635 111 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 SNORA31.16-201ENST00000516773 139 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 AC009163.5-201ENST00000575421 637 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 AC011471.1-201ENST00000585766 187 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.28□□□□□ -1.72
CUEDC1Q9NWM3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
CUEDC1Q9NWM3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 U8.1-201ENST00000362843 134 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 SNORD45.3-201ENST00000363836 72 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-294P-201ENST00000364999 102 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-1280P-201ENST00000365211 107 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 MIR208B-201ENST00000401172 77 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 AL512604.1-201ENST00000404812 257 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 SNORA11F-201ENST00000408237 128 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 AC012308.1-201ENST00000451232 178 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 AC090525.1-201ENST00000479116 478 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 SNORA31.21-201ENST00000517180 77 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 AC093331.1-201ENST00000521474 169 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 AC091178.2-201ENST00000584401 117 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 MIR3138-201ENST00000585238 82 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 SNORD11B-201ENST00000607707 90 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 uc_338.28-201ENST00000612082 187 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 AL021997.2-201ENST00000615674 271 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 AC018555.1-201ENST00000567548 1980 ntBASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CUEDC1Q9NWM3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 RNU1-132P-201ENST00000364300 164 ntBASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-136P-201ENST00000384663 107 ntBASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 AL691449.1-201ENST00000426570 421 ntBASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 AC017083.1-201ENST00000428093 483 ntBASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 AC103975.1-201ENST00000482506 483 ntBASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 AC091167.1-201ENST00000492017 396 ntBASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 AC090897.2-201ENST00000581715 130 ntBASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 AL162713.1-201ENST00000604480 262 ntBASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 AC007546.2-201ENST00000623996 360 ntBASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms