Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 RPS3AP3-201ENST00000411933 242 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 AL133217.1-201ENST00000450980 425 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 snoU13.30-201ENST00000458951 104 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 RPL9P9-202ENST00000466501 579 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 HMGN2P9-201ENST00000476875 229 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 MTCO3P7-201ENST00000510008 774 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 AC091874.1-201ENST00000511402 339 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 SNORD27.1-201ENST00000516319 72 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 RNU6-1098P-201ENST00000516772 96 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 HSPE1P4-201ENST00000550617 308 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 HMGB1P33-201ENST00000563485 527 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 PCGEM1.1-201ENST00000613431 131 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.06□□□□□ -2.24
SDHAF3Q9NRP4 RNU6-438P-201ENST00000365561 103 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 RNU6-378P-201ENST00000384324 107 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 MIR520A-201ENST00000384862 85 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 MIR454-201ENST00000390180 115 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 AL591704.2-201ENST00000421658 181 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 RPL23AP95-201ENST00000426806 265 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 AC078809.1-201ENST00000427601 140 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 AC009961.2-201ENST00000435771 251 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 OR2AQ1P-201ENST00000451972 200 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 AC007547.1-201ENST00000462177 490 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 TRMT112P2-201ENST00000512910 132 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 AC109479.2-201ENST00000517842 174 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 AC090821.2-201ENST00000523552 176 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 AC021231.3-201ENST00000558497 370 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 MIR3937-201ENST00000580135 106 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 BNIP3P8-201ENST00000597863 560 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 NIFKP6-201ENST00000598115 845 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 BNIP3P10-201ENST00000605360 577 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 AC083806.3-201ENST00000614016 455 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 AL603839.4-201ENST00000624658 1005 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 MTND4P4-201ENST00000439033 1366 ntBASIC1.05□□□□□ -2.24
SDHAF3Q9NRP4 RNU6-862P-201ENST00000362804 105 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 U3.9-201ENST00000363823 204 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 RNU6-1029P-201ENST00000384109 107 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 MIR1-2-201ENST00000384961 85 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 RNU6-360P-201ENST00000390944 104 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AL161935.2-201ENST00000414627 60 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 HIGD1AP15-201ENST00000416198 280 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 ISCA1P6-201ENST00000427740 390 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 GPR143P-201ENST00000434155 205 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AL596276.1-201ENST00000434465 418 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 PGBD4P5-201ENST00000445958 426 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AC079781.2-201ENST00000446424 169 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AC016925.1-201ENST00000458303 298 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 RPS29P15-201ENST00000458329 171 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 RNA5SP269-201ENST00000459032 137 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 RNU7-14P-201ENST00000459331 62 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AC010531.2-201ENST00000465012 153 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AC093852.1-201ENST00000503587 266 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 SNORA25.17-201ENST00000517184 124 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AC019176.1-201ENST00000518519 225 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AP003072.2-201ENST00000527756 676 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 MIR3923-201ENST00000579521 83 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 VN1R107P-201ENST00000601784 209 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AP003465.2-201ENST00000602571 373 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AC069114.2-201ENST00000604699 304 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AC022418.1-201ENST00000624118 445 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AC091895.1-201ENST00000624494 256 ntBASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.04□□□□□ -2.24
SDHAF3Q9NRP4 AL159152.1-201ENST00000635019 2587 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 MIR337-201ENST00000362281 93 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 RNY1P10-201ENST00000363268 113 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 RNU4-56P-201ENST00000364700 142 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 SNORD31B-201ENST00000364977 69 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 SNORA36A-201ENST00000384221 132 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 MTND3P17-201ENST00000416968 344 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 Z99497.1-201ENST00000421282 135 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 MTND5P25-201ENST00000430499 799 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 AL133396.1-201ENST00000432048 687 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 DYNLT3P2-201ENST00000442517 295 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.03□□□□□ -2.24
SDHAF3Q9NRP4 Y_RNA.638-201ENST00000459374 113 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms