Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CETN4P-201ENST00000432407 469 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 MTCO2P3-201ENST00000442543 421 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 RPS27AP8-201ENST00000452665 445 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 snoU13.9-201ENST00000458927 103 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 RNU7-180P-201ENST00000459240 63 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 RNU7-14P-201ENST00000459331 62 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 AC104564.1-201ENST00000493028 407 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 AK6P1-201ENST00000540219 478 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 AC090115.3-201ENST00000553218 849 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 AC145350.1-201ENST00000567426 208 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 SNORA77B-201ENST00000578179 125 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 MIR5583-1-201ENST00000580941 59 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 MIR4422-201ENST00000581938 83 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 AC040904.1-201ENST00000590850 223 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 AC064807.4-201ENST00000607201 407 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 AC008536.2-201ENST00000607284 349 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 AL136221.1-201ENST00000621449 509 ntBASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SLIRPQ9GZT3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 SNORA36A-201ENST00000384221 132 ntBASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 MTCO1P21-201ENST00000416634 589 ntBASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 AC012306.1-201ENST00000423267 114 ntBASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 RPS6P15-201ENST00000431996 751 ntBASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 AC099677.2-201ENST00000436385 175 ntBASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 AC007395.1-201ENST00000451333 677 ntBASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 AC021146.2-201ENST00000504736 556 ntBASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 SNORD60.2-201ENST00000516883 86 ntBASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 AP003034.1-201ENST00000534621 422 ntBASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SLIRPQ9GZT3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 AL161722.3-201ENST00000605789 2983 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 U8.2-201ENST00000363156 134 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 RNU6-348P-201ENST00000384386 107 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 RN7SKP142-201ENST00000411236 328 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 RPL21P111-201ENST00000418453 477 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 SDAD1P3-201ENST00000427380 333 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 SNRPGP13-201ENST00000442212 177 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 AC010531.2-201ENST00000465012 153 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 RPL26P26-201ENST00000480251 434 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 MIR4528-201ENST00000577763 90 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.18□□□□□ -2.22
SLIRPQ9GZT3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 RNU6-414P-201ENST00000363705 104 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 RNU4-13P-201ENST00000364019 141 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 RNU6-1103P-201ENST00000384150 107 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 MIR520A-201ENST00000384862 85 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 RNU6-360P-201ENST00000390944 104 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 MIR208B-201ENST00000401172 77 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 MTCYBP8-201ENST00000422855 651 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AC092447.3-201ENST00000426027 686 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AC245047.4-201ENST00000433189 144 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AC245517.4-201ENST00000448601 281 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AC073415.1-201ENST00000449240 153 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 RNU7-138P-201ENST00000459479 64 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 RPL9P9-202ENST00000466501 579 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 RPL31P58-201ENST00000469001 379 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 RPS23P5-201ENST00000495419 428 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 HMGN1P13-201ENST00000505795 138 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 ARL2BPP4-201ENST00000506854 471 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AC016256.1-201ENST00000547971 354 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AC090517.1-201ENST00000569307 266 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AC013412.1-201ENST00000610687 192 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 AL159152.1-201ENST00000635019 2587 ntBASIC1.17□□□□□ -2.22
SLIRPQ9GZT3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 RNU6-271P-201ENST00000363858 105 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 RNU6-996P-201ENST00000365438 107 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms