Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC009248.2-201ENST00000619826 254 ntBASIC2.14□□□□□ -2.07
CPNE1Q99829 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.14□□□□□ -2.07
CPNE1Q99829 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.14□□□□□ -2.07
CPNE1Q99829 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
CPNE1Q99829 RNA5SP289-201ENST00000362332 137 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 Y_RNA.72-201ENST00000362894 103 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 U3.9-201ENST00000363823 204 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 RNU6-1286P-201ENST00000383871 107 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 RNU6-784P-201ENST00000384330 106 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 SNORA12-201ENST00000391162 147 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.13□□□□□ -2.07
CPNE1Q99829 RPL30P16-201ENST00000419341 429 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 AL139415.2-201ENST00000431968 163 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 AL353572.1-201ENST00000442490 417 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 AL021397.1-201ENST00000451806 248 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.13□□□□□ -2.07
CPNE1Q99829 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.13□□□□□ -2.07
CPNE1Q99829 RNU6-717P-201ENST00000459076 104 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 RNU4-49P-201ENST00000516080 140 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.13□□□□□ -2.07
CPNE1Q99829 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.13□□□□□ -2.07
CPNE1Q99829 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CPNE1Q99829 MIR3976-201ENST00000606807 139 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 MIR6840-201ENST00000611937 71 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 PCGEM1.1-201ENST00000613431 131 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 AC005520.5-201ENST00000613926 164 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CPNE1Q99829 AL136360.1-201ENST00000503377 1900 ntBASIC2.13□□□□□ -2.07
CPNE1Q99829 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CPNE1Q99829 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CPNE1Q99829 RNU6-968P-201ENST00000384076 107 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 SNORA29-201ENST00000384183 140 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 MIR517A-201ENST00000385001 87 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CPNE1Q99829 AL356776.1-201ENST00000406574 447 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 MTND1P2-201ENST00000430604 821 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 RPL23AP7-203ENST00000449021 469 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 AL137159.1-201ENST00000452808 512 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.12□□□□□ -2.07
CPNE1Q99829 AC018710.1-201ENST00000506509 158 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 AC010486.1-201ENST00000511793 424 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 RNU6-1088P-201ENST00000516850 104 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 HSPE1P18-201ENST00000517602 280 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 AP005639.2-201ENST00000527592 928 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.12□□□□□ -2.07
CPNE1Q99829 EIF4A1P12-201ENST00000551910 141 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 SNRPGP18-201ENST00000553000 214 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 AC233702.2-202ENST00000562547 291 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 AC109446.1-201ENST00000566172 220 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.12□□□□□ -2.07
CPNE1Q99829 POLR3GP2-201ENST00000588366 668 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 AL031274.2-201ENST00000599419 203 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 AP000654.2-201ENST00000605633 586 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 AC124303.1-201ENST00000605703 360 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 AL022345.1-201ENST00000607292 135 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 AC019193.3-201ENST00000609144 554 ntBASIC2.12□□□□□ -2.07
CPNE1Q99829 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
CPNE1Q99829 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CPNE1Q99829 Y_RNA.301-201ENST00000364990 103 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 RNU6-26P-201ENST00000383985 107 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 MIR208B-201ENST00000401172 77 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 MTND1P23-201ENST00000416931 372 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 AL139396.1-201ENST00000421137 167 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.11□□□□□ -2.07
CPNE1Q99829 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE1Q99829 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE1Q99829 RNU6-329P-201ENST00000459618 107 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE1Q99829 RNU7-193P-201ENST00000516723 65 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 RNU6-566P-201ENST00000516790 107 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 RNA5SP454-201ENST00000517231 127 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE1Q99829 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.11□□□□□ -2.07
CPNE1Q99829 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE1Q99829 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE1Q99829 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.11□□□□□ -2.07
CPNE1Q99829 AC011712.1-201ENST00000588959 234 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 MTND4P1-201ENST00000457501 1466 ntBASIC2.11□□□□□ -2.07
CPNE1Q99829 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CPNE1Q99829 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CPNE1Q99829 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CPNE1Q99829 AP006437.1-201ENST00000641440 3685 ntBASIC2.1□□□□□ -2.07
CPNE1Q99829 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
CPNE1Q99829 RNU5B-2P-201ENST00000363036 113 ntBASIC2.1□□□□□ -2.07
CPNE1Q99829 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
CPNE1Q99829 RNU6-301P-201ENST00000384277 107 ntBASIC2.1□□□□□ -2.07
CPNE1Q99829 RNU6-378P-201ENST00000384324 107 ntBASIC2.1□□□□□ -2.07
CPNE1Q99829 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CPNE1Q99829 SRIP3-201ENST00000413200 219 ntBASIC2.1□□□□□ -2.07
CPNE1Q99829 AL139413.1-201ENST00000421309 217 ntBASIC2.1□□□□□ -2.07
CPNE1Q99829 MTCO3P46-201ENST00000425787 232 ntBASIC2.1□□□□□ -2.07
CPNE1Q99829 IPO7P1-201ENST00000442031 636 ntBASIC2.1□□□□□ -2.07
CPNE1Q99829 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.1□□□□□ -2.07
CPNE1Q99829 PRELID3BP1-201ENST00000457142 540 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms