Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SNORA40.19-201ENST00000390846 128 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 AL031003.1-201ENST00000404229 172 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 OOSP1P1-201ENST00000423265 274 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 AC083863.1-201ENST00000438811 231 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.26□□□□□ -1.73
CALR3Q96L12 AC231760.1-201ENST00000498002 260 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 RNU6-1212P-201ENST00000517023 104 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.26□□□□□ -1.73
CALR3Q96L12 MIR4715-201ENST00000584117 79 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.26□□□□□ -1.73
CALR3Q96L12 MIR7151-201ENST00000617477 60 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 AC244205.2-202ENST00000635781 342 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CALR3Q96L12 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CALR3Q96L12 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CALR3Q96L12 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.26□□□□□ -1.73
CALR3Q96L12 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CALR3Q96L12 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
CALR3Q96L12 RNA5SP447-201ENST00000363749 119 ntBASIC4.25□□□□□ -1.73
CALR3Q96L12 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CALR3Q96L12 MIR1294-201ENST00000408503 142 ntBASIC4.25□□□□□ -1.73
CALR3Q96L12 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CALR3Q96L12 RN7SL93P-201ENST00000463035 293 ntBASIC4.25□□□□□ -1.73
CALR3Q96L12 RN7SL604P-201ENST00000492589 296 ntBASIC4.25□□□□□ -1.73
CALR3Q96L12 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.25□□□□□ -1.73
CALR3Q96L12 Y_RNA.662-201ENST00000516028 97 ntBASIC4.25□□□□□ -1.73
CALR3Q96L12 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.25□□□□□ -1.73
CALR3Q96L12 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.25□□□□□ -1.73
CALR3Q96L12 MIR5692C2-201ENST00000577959 77 ntBASIC4.25□□□□□ -1.73
CALR3Q96L12 AC010620.2-201ENST00000600135 313 ntBASIC4.25□□□□□ -1.73
CALR3Q96L12 AL356218.2-201ENST00000605264 187 ntBASIC4.25□□□□□ -1.73
CALR3Q96L12 AC107294.3-201ENST00000609211 526 ntBASIC4.25□□□□□ -1.73
CALR3Q96L12 AL008718.3-201ENST00000610217 321 ntBASIC4.25□□□□□ -1.73
CALR3Q96L12 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
CALR3Q96L12 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CALR3Q96L12 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CALR3Q96L12 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CALR3Q96L12 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CALR3Q96L12 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CALR3Q96L12 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CALR3Q96L12 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.24□□□□□ -1.73
CALR3Q96L12 RNU6-746P-201ENST00000384112 109 ntBASIC4.24□□□□□ -1.73
CALR3Q96L12 RNU6-710P-201ENST00000410424 105 ntBASIC4.24□□□□□ -1.73
CALR3Q96L12 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.24□□□□□ -1.73
CALR3Q96L12 RN7SL610P-201ENST00000463845 291 ntBASIC4.24□□□□□ -1.73
CALR3Q96L12 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.24□□□□□ -1.73
CALR3Q96L12 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
CALR3Q96L12 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.24□□□□□ -1.73
CALR3Q96L12 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.24□□□□□ -1.73
CALR3Q96L12 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.24□□□□□ -1.73
CALR3Q96L12 AL591424.2-201ENST00000617023 128 ntBASIC4.24□□□□□ -1.73
CALR3Q96L12 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.24□□□□□ -1.73
CALR3Q96L12 U6.106-201ENST00000636360 105 ntBASIC4.24□□□□□ -1.73
CALR3Q96L12 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CALR3Q96L12 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CALR3Q96L12 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CALR3Q96L12 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CALR3Q96L12 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CALR3Q96L12 RNU1-18P-201ENST00000363062 164 ntBASIC4.23□□□□□ -1.73
CALR3Q96L12 SNORA51.4-201ENST00000364993 124 ntBASIC4.23□□□□□ -1.73
CALR3Q96L12 Y_RNA.435-201ENST00000384095 112 ntBASIC4.23□□□□□ -1.73
CALR3Q96L12 MIR192-201ENST00000384915 110 ntBASIC4.23□□□□□ -1.73
CALR3Q96L12 RNU6-493P-201ENST00000391321 108 ntBASIC4.23□□□□□ -1.73
CALR3Q96L12 AL139281.1-201ENST00000422120 335 ntBASIC4.23□□□□□ -1.73
CALR3Q96L12 MICF-203ENST00000432679 129 ntBASIC4.23□□□□□ -1.73
CALR3Q96L12 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.23□□□□□ -1.73
CALR3Q96L12 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.23□□□□□ -1.73
CALR3Q96L12 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CALR3Q96L12 MIR8059-201ENST00000620427 81 ntBASIC4.23□□□□□ -1.73
CALR3Q96L12 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CALR3Q96L12 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.23□□□□□ -1.73
CALR3Q96L12 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.23□□□□□ -1.73
CALR3Q96L12 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.23□□□□□ -1.73
CALR3Q96L12 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
CALR3Q96L12 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.22□□□□□ -1.73
CALR3Q96L12 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.22□□□□□ -1.73
CALR3Q96L12 RNU6-653P-201ENST00000363074 106 ntBASIC4.22□□□□□ -1.73
CALR3Q96L12 RNU6-1274P-201ENST00000384557 107 ntBASIC4.22□□□□□ -1.73
CALR3Q96L12 MIR300-201ENST00000401138 83 ntBASIC4.22□□□□□ -1.73
CALR3Q96L12 HMGN2P9-201ENST00000476875 229 ntBASIC4.22□□□□□ -1.73
CALR3Q96L12 AC083906.5-201ENST00000503722 328 ntBASIC4.22□□□□□ -1.73
CALR3Q96L12 AC074198.2-201ENST00000508153 258 ntBASIC4.22□□□□□ -1.73
CALR3Q96L12 RAB9BP1-201ENST00000519581 626 ntBASIC4.22□□□□□ -1.73
CALR3Q96L12 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.22□□□□□ -1.73
CALR3Q96L12 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.22□□□□□ -1.73
CALR3Q96L12 MIR4308-201ENST00000580634 81 ntBASIC4.22□□□□□ -1.73
CALR3Q96L12 MIR7157-201ENST00000635801 60 ntBASIC4.22□□□□□ -1.73
CALR3Q96L12 U6.115-201ENST00000636045 103 ntBASIC4.22□□□□□ -1.73
CALR3Q96L12 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.22□□□□□ -1.73
CALR3Q96L12 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CALR3Q96L12 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CALR3Q96L12 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
CALR3Q96L12 AC010329.5-201ENST00000623497 2174 ntBASIC4.21□□□□□ -1.73
CALR3Q96L12 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CALR3Q96L12 AL357075.1-201ENST00000404107 726 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 AC016397.1-201ENST00000412463 242 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 RNU7-14P-201ENST00000459331 62 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 Y_RNA.637-201ENST00000459424 114 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 AC146507.2-201ENST00000460608 476 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms