Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 SNORA48.8-201ENST00000391324 134 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AC091179.3-201ENST00000474761 144 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 RNA5SP112-201ENST00000515937 99 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 RNU4-71P-201ENST00000516258 113 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 RRN3P3-201ENST00000549207 578 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AC018448.1-201ENST00000552843 316 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 U2.14-201ENST00000615943 113 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AC005562.2-201ENST00000618264 111 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AC127459.3-201ENST00000624328 466 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AP000553.6-201ENST00000641242 118 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 GABRG2-229ENST00000641017 3628 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 Y_RNA.277-201ENST00000364754 102 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 RNU6-338P-201ENST00000383888 105 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 RNU6-514P-201ENST00000384208 107 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 MIR549A-201ENST00000385268 96 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 IFNA11P-201ENST00000446352 526 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 AL139109.1-201ENST00000455491 297 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 RN7SL703P-201ENST00000578485 302 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 MIR5685-201ENST00000579080 79 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 AC010900.2-201ENST00000604508 210 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 AL357075.2-201ENST00000614906 189 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 TCL6_2.1-201ENST00000615162 119 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 UCA1.1-201ENST00000620952 75 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 AL354798.1-201ENST00000622505 329 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 AC018692.3-201ENST00000623929 123 ntBASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
FOXRED1Q96CU9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.15□□□□□ -1.9
FOXRED1Q96CU9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
FOXRED1Q96CU9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.15□□□□□ -1.9
FOXRED1Q96CU9 SNORA25.1-201ENST00000362326 128 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 Y_RNA.65-201ENST00000362846 100 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 RNU6-200P-201ENST00000364743 107 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 Y_RNA.331-201ENST00000365267 102 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 RNU6-213P-201ENST00000384051 104 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 U3.39-201ENST00000408569 239 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 AC009414.1-201ENST00000427200 443 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 AC091179.1-201ENST00000461606 579 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 AC008739.2-201ENST00000597006 317 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 AC034229.5-201ENST00000624258 185 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 AC110079.1-202ENST00000635213 138 ntBASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FOXRED1Q96CU9 AC068647.1-201ENST00000489539 2265 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 Y_RNA.286-201ENST00000364813 102 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 Y_RNA.539-201ENST00000384635 107 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 SNORA46.1-201ENST00000391069 153 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 SNORD58.1-201ENST00000391313 66 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 RNA5SP475-201ENST00000410568 110 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 AC017079.2-201ENST00000416102 485 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 AL139247.1-201ENST00000422768 325 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 AC027124.2-201ENST00000428249 105 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 AL445584.1-201ENST00000431451 330 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 RPS29P7-201ENST00000439662 171 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 AC005042.3-201ENST00000453230 174 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 AC006445.1-201ENST00000491925 405 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 RN7SL323P-201ENST00000494712 295 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 Y_RNA.700-201ENST00000516806 100 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 HSPE1P18-201ENST00000517602 280 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 AC103810.1-201ENST00000579873 453 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 AC008749.1-201ENST00000597650 306 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 AC009779.6-201ENST00000603972 165 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 RPL17P51-201ENST00000605218 238 ntBASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FOXRED1Q96CU9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXRED1Q96CU9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms