Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNU1-76P-201ENST00000362903 159 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 RNU5B-2P-201ENST00000363036 113 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 SNORA5B-201ENST00000363786 132 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 RNU2-41P-201ENST00000410991 178 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 ZNF885P-201ENST00000420174 1098 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.08□□□□□ -2.08
VPS33AQ96AX1 USP9YP28-201ENST00000435142 589 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 AC008413.1-201ENST00000511864 177 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 MTND1P35-201ENST00000526739 508 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 AP005639.2-201ENST00000527592 928 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VPS33AQ96AX1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS33AQ96AX1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS33AQ96AX1 FGF7P1-201ENST00000582820 288 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 AC243960.4-201ENST00000600532 288 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 RMST_6.1-201ENST00000611980 203 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 AC130454.1-201ENST00000622948 401 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
VPS33AQ96AX1 AC131280.1-202ENST00000624067 4211 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 RNA5SP289-201ENST00000362332 137 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 SNORA29-201ENST00000384183 140 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 Y_RNA.450-201ENST00000384198 113 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 SNORA8-201ENST00000384574 139 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 Y_RNA.573-201ENST00000384763 105 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 MIR597-201ENST00000384968 97 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 RNU2-40P-201ENST00000410833 196 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 Z92545.1-201ENST00000411782 234 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 VN1R36P-201ENST00000414936 291 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AC123900.1-201ENST00000420390 96 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 EIF4EP2-201ENST00000422816 654 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 MTND1P34-201ENST00000438556 671 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AL035666.1-201ENST00000446195 348 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 RPL23AP7-203ENST00000449021 469 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS33AQ96AX1 PMCHL2-203ENST00000457791 237 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 RNU1-131P-201ENST00000458943 161 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 RNU7-66P-201ENST00000459469 62 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AC096745.1-201ENST00000509945 370 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 FAM206BP-201ENST00000510179 541 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AC010486.1-201ENST00000511793 424 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS33AQ96AX1 RNA5SP281-201ENST00000516504 135 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.07□□□□□ -2.08
VPS33AQ96AX1 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS33AQ96AX1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 CTHRC1P1-201ENST00000605383 469 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AC025754.2-201ENST00000606491 432 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AL133215.3-201ENST00000609801 448 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AC098657.3-201ENST00000620434 263 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AC243829.7-201ENST00000633081 225 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 AC024614.3-201ENST00000637860 256 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 CENPCP1-201ENST00000533085 2578 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 LINC02555-201ENST00000563933 1951 ntBASIC2.07□□□□□ -2.08
VPS33AQ96AX1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
VPS33AQ96AX1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VPS33AQ96AX1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VPS33AQ96AX1 RNU6-23P-201ENST00000363283 107 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 Y_RNA.123-201ENST00000363338 102 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 SNORA32.2-201ENST00000384049 122 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 RNU6-968P-201ENST00000384076 107 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 RNU6-784P-201ENST00000384330 106 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 Y_RNA.554-201ENST00000384672 102 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 RNA5SP118-201ENST00000410385 109 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.06□□□□□ -2.08
VPS33AQ96AX1 AC244636.1-201ENST00000421152 228 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS33AQ96AX1 ATP5EP1-201ENST00000510257 156 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 MRPS17P9-201ENST00000511924 393 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS33AQ96AX1 Y_RNA.655-201ENST00000515919 96 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 RNU5F-4P-201ENST00000516581 114 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS33AQ96AX1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS33AQ96AX1 AC090517.1-201ENST00000569307 266 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.06□□□□□ -2.08
VPS33AQ96AX1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS33AQ96AX1 RMST_3.1-201ENST00000611651 109 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 CTSLP2-204ENST00000629029 392 ntBASIC2.06□□□□□ -2.08
VPS33AQ96AX1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VPS33AQ96AX1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS33AQ96AX1 RNA5SP160-201ENST00000364866 120 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 SNORD31B-201ENST00000364977 69 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 RNU6-438P-201ENST00000365561 103 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 Y_RNA.516-201ENST00000384541 124 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 MIR521-1-201ENST00000384902 87 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 MIR483-201ENST00000385070 76 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 RNU6-332P-201ENST00000391193 108 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 RNU6-1093P-201ENST00000391194 107 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 RNA5SP212-201ENST00000391223 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms