Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL356057.3-201ENST00000402607 340 ntBASIC2.73□□□□□ -1.97
HMGB4Q8WW32 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGB4Q8WW32 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGB4Q8WW32 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGB4Q8WW32 AC021146.2-201ENST00000504736 556 ntBASIC2.73□□□□□ -1.97
HMGB4Q8WW32 AC093303.1-201ENST00000514549 295 ntBASIC2.73□□□□□ -1.97
HMGB4Q8WW32 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGB4Q8WW32 AL713866.2-201ENST00000603579 219 ntBASIC2.73□□□□□ -1.97
HMGB4Q8WW32 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGB4Q8WW32 RNU4-15P-201ENST00000362613 141 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 RNU4-9P-201ENST00000364951 139 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 AL139095.1-201ENST00000404326 391 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 BMS1P22-201ENST00000414726 313 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 AC012306.1-201ENST00000423267 114 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 AC092427.1-202ENST00000430569 476 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 Z82188.1-201ENST00000436709 154 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 UBBP3-201ENST00000445497 241 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGB4Q8WW32 RN7SKP43-201ENST00000516173 320 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 RNU6-567P-201ENST00000516746 107 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 MIR5701-3-201ENST00000578890 82 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 MIR5701-1-201ENST00000585138 82 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 AC010928.2-201ENST00000588017 287 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 AC073544.1-201ENST00000600110 1595 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 AC080078.3-201ENST00000605407 463 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 MIR5701-2-201ENST00000615634 82 ntBASIC2.72□□□□□ -1.97
HMGB4Q8WW32 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGB4Q8WW32 snoU2_19.1-201ENST00000362361 80 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 RNY1P16-201ENST00000363063 111 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 Y_RNA.146-201ENST00000363549 102 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 RNU4-56P-201ENST00000364700 142 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 RNU6-1180P-201ENST00000364935 107 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 SNORA51.4-201ENST00000364993 124 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGB4Q8WW32 RNU6-1040P-201ENST00000383974 107 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 FO393413.1-201ENST00000402892 195 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 RNA5SP494-201ENST00000410653 129 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGB4Q8WW32 AL353997.1-201ENST00000432936 108 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 RPL23AP50-201ENST00000434149 455 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 AL445687.1-201ENST00000439946 251 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 AP000705.1-201ENST00000454567 350 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGB4Q8WW32 AC090515.1-201ENST00000465295 476 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 AC087477.1-201ENST00000465747 340 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 RPL30P10-201ENST00000488148 337 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 AC022493.2-201ENST00000506122 481 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 RNU6-470P-201ENST00000515954 104 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 RNU6-120P-201ENST00000516077 103 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.71□□□□□ -1.98
HMGB4Q8WW32 CYP4A27P-201ENST00000567218 190 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGB4Q8WW32 MIR4506-201ENST00000584693 77 ntBASIC2.71□□□□□ -1.98
HMGB4Q8WW32 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGB4Q8WW32 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGB4Q8WW32 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGB4Q8WW32 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGB4Q8WW32 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
HMGB4Q8WW32 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HMGB4Q8WW32 Y_RNA.813-201ENST00000364639 102 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 MIR887-201ENST00000401258 79 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 RNA5SP201-201ENST00000410316 124 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGB4Q8WW32 UBE2V1P7-201ENST00000446395 340 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 snoU13.6-201ENST00000458785 104 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 RN7SKP210-201ENST00000459176 261 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGB4Q8WW32 AC003982.1-202ENST00000469928 248 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 AP004217.1-201ENST00000480579 346 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 AC027575.1-201ENST00000481064 460 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 AC068781.1-201ENST00000488231 618 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 RPL17P19-201ENST00000489069 552 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 AL590705.4-201ENST00000532209 134 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
HMGB4Q8WW32 MIR3923-201ENST00000579521 83 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HMGB4Q8WW32 AL670379.2-201ENST00000604983 252 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGB4Q8WW32 AC005520.5-201ENST00000613926 164 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 AL590808.1-201ENST00000618696 141 ntBASIC2.7□□□□□ -1.98
HMGB4Q8WW32 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HMGB4Q8WW32 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGB4Q8WW32 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HMGB4Q8WW32 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HMGB4Q8WW32 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HMGB4Q8WW32 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HMGB4Q8WW32 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGB4Q8WW32 MIR26A1-201ENST00000362205 77 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 SNORD115-32-201ENST00000364079 82 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 Y_RNA.394-201ENST00000383942 103 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 MIR559-201ENST00000385188 96 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 MTCYBP2-201ENST00000407745 171 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 RN7SKP123-201ENST00000410732 291 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 RPL21P2-201ENST00000440049 481 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 snoU13.30-201ENST00000458951 104 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGB4Q8WW32 SUB1P3-201ENST00000564581 315 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 AC104581.2-201ENST00000572227 430 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms