Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNU1-104P-201ENST00000517280 175 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC010186.2-204ENST00000537668 439 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AL512360.1-201ENST00000555346 234 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC103996.1-201ENST00000555468 102 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC092325.1-201ENST00000566449 554 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 MIR4775-201ENST00000581168 75 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 MIR3117-201ENST00000584034 78 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC139792.3-201ENST00000623525 224 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 SNORA68.1-201ENST00000364537 132 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 SNORA69-201ENST00000383895 132 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1127P-201ENST00000384580 107 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 Y_RNA.582-201ENST00000391023 95 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 RNU2-23P-201ENST00000410545 195 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 MTCO1P20-201ENST00000425366 358 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AL589823.1-201ENST00000429577 183 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 RPL7P43-201ENST00000478876 753 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AC011005.2-201ENST00000487324 359 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AC104136.1-201ENST00000512969 394 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 RNU5B-3P-201ENST00000516601 115 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 RNA5SP503-201ENST00000517047 117 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AC123912.5-201ENST00000605470 343 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AC007684.1-201ENST00000609671 477 ntBASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.35□□□□□ -2.19
SHROOM3Q8TF72 RNU6-266P-201ENST00000364225 107 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 Y_RNA.231-201ENST00000364358 102 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 RNU6-996P-201ENST00000365438 107 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 RNU6-622P-201ENST00000384272 103 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 MIR147B-201ENST00000390185 80 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 RNU6-648P-201ENST00000410190 107 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 Y_RNA.619-201ENST00000410951 90 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 USP9YP18-201ENST00000425912 695 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 UBE2V1P8-201ENST00000437166 265 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 NDUFB1P2-201ENST00000449477 176 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AC003071.1-201ENST00000451219 789 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AL356010.1-201ENST00000456364 102 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 RNA5SP112-201ENST00000515937 99 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 RNU5F-2P-201ENST00000516066 82 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 SNORA14.1-201ENST00000516113 141 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AC069113.1-201ENST00000517763 267 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AC109329.1-201ENST00000518744 317 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AP003034.1-201ENST00000534621 422 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AC004492.1-201ENST00000607036 742 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AP001330.5-201ENST00000607176 411 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AC092807.2-201ENST00000609367 243 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AL354950.2-201ENST00000617939 290 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AC022418.1-201ENST00000624118 445 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 AC073869.6-201ENST00000640656 341 ntBASIC1.34□□□□□ -2.19
SHROOM3Q8TF72 snoU2_19.1-201ENST00000362361 80 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 RNU6-384P-201ENST00000364900 104 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 RNU6-43P-201ENST00000384302 107 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 RNU6-933P-201ENST00000384424 107 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 Y_RNA.554-201ENST00000384672 102 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 MIR181A1-201ENST00000385026 110 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 SNORA67.6-201ENST00000391093 99 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 SNORA12-201ENST00000391162 147 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 RNU6-607P-201ENST00000411283 108 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 RPS3AP44-201ENST00000425466 790 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 FABP5P14-201ENST00000437273 393 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 MTND2P29-201ENST00000438595 412 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 AL445687.1-201ENST00000439946 251 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 AL163973.1-201ENST00000484753 577 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 RNA5SP401-201ENST00000515920 127 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 AC109635.3-201ENST00000529536 185 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 AC008752.3-201ENST00000588113 712 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 AC107304.1-201ENST00000604229 296 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 AC092954.2-201ENST00000609103 430 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 DISC2.1-201ENST00000612827 205 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 MIR3662-201ENST00000637030 95 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 RBBP8P1-201ENST00000449447 1844 ntBASIC1.34□□□□□ -2.2
SHROOM3Q8TF72 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 HAUS6P2-201ENST00000433254 2404 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 RNU6-1210P-201ENST00000363775 107 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 RNU4-12P-201ENST00000365233 139 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 Y_RNA.453-201ENST00000384223 109 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 OR9R1P-201ENST00000412200 877 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms