Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC090525.1-201ENST00000479116 478 ntBASIC3.41□□□□□ -1.86
SH3RF2Q8TEC5 SEPT14P8-201ENST00000508026 178 ntBASIC3.41□□□□□ -1.86
SH3RF2Q8TEC5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.41□□□□□ -1.86
SH3RF2Q8TEC5 SNORA31.21-201ENST00000517180 77 ntBASIC3.41□□□□□ -1.86
SH3RF2Q8TEC5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.41□□□□□ -1.86
SH3RF2Q8TEC5 UBL5P4-201ENST00000562584 236 ntBASIC3.41□□□□□ -1.86
SH3RF2Q8TEC5 SNORD113-5-201ENST00000607261 78 ntBASIC3.41□□□□□ -1.86
SH3RF2Q8TEC5 SNORD98-201ENST00000636377 67 ntBASIC3.41□□□□□ -1.86
SH3RF2Q8TEC5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
SH3RF2Q8TEC5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SH3RF2Q8TEC5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SH3RF2Q8TEC5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.4□□□□□ -1.86
SH3RF2Q8TEC5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SH3RF2Q8TEC5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SH3RF2Q8TEC5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SH3RF2Q8TEC5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 RNA5SP361-201ENST00000362686 118 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 RNU6-1145P-201ENST00000384246 107 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 RNU6-1001P-201ENST00000411265 100 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 snoU13.6-201ENST00000458785 104 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 AC007215.1-201ENST00000464893 276 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 AC107934.2-201ENST00000518653 310 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 AK6P2-201ENST00000549020 471 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 MIR3923-201ENST00000579521 83 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 MIR4325-201ENST00000583049 90 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 AL391813.1-201ENST00000603098 260 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 BX284668.6-201ENST00000606899 438 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 RMST_8.1-201ENST00000610287 165 ntBASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SH3RF2Q8TEC5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 RNU1-70P-201ENST00000362618 164 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 SNORD27-201ENST00000363981 72 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 Y_RNA.230-201ENST00000364348 109 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 RNU6-290P-201ENST00000365212 101 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 RNU6-245P-201ENST00000384020 107 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 MIR329-1-201ENST00000385028 80 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 SNORA53-201ENST00000391141 249 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 Y_RNA.595-201ENST00000410403 105 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 RNU2-20P-201ENST00000410425 191 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AC112220.1-201ENST00000434628 355 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AC005002.2-201ENST00000438228 269 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AP000705.1-201ENST00000454567 350 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AC109925.1-201ENST00000478069 331 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 GZMAP1-201ENST00000503054 631 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 RNU6-496P-201ENST00000516145 99 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 SNORA31.16-201ENST00000516773 139 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 RNU6-1231P-201ENST00000517185 103 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 MIR4425-201ENST00000580572 84 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AL078605.1-201ENST00000603529 500 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AC037487.3-201ENST00000606668 112 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AC010999.1-201ENST00000611856 324 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 RNVU1-4-201ENST00000612985 164 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AC005520.5-201ENST00000613926 164 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 AC017071.1-201ENST00000564407 2204 ntBASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SH3RF2Q8TEC5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 BX322639.1-202ENST00000423987 2213 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 RNU1-105P-201ENST00000363470 161 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 SNORD6-201ENST00000365444 73 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 Y_RNA.541-201ENST00000384640 113 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 RNA5SP252-201ENST00000391131 119 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 snoU13.14-201ENST00000459372 104 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 RN7SL863P-201ENST00000462370 296 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 AC073901.1-201ENST00000462471 408 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 AC006445.1-201ENST00000491925 405 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 RNU6-111P-201ENST00000517179 105 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 TGIF1P1-201ENST00000558095 802 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 uc_338.1-201ENST00000612113 180 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 AL162274.2-201ENST00000614406 332 ntBASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SH3RF2Q8TEC5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.37□□□□□ -1.87
SH3RF2Q8TEC5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SH3RF2Q8TEC5 RNU6-873P-201ENST00000363833 107 ntBASIC3.37□□□□□ -1.87
SH3RF2Q8TEC5 RNU6-21P-201ENST00000384710 107 ntBASIC3.37□□□□□ -1.87
SH3RF2Q8TEC5 U3.26-201ENST00000391236 204 ntBASIC3.37□□□□□ -1.87
SH3RF2Q8TEC5 RNU2-64P-201ENST00000411315 191 ntBASIC3.37□□□□□ -1.87
SH3RF2Q8TEC5 AL445305.1-201ENST00000432577 575 ntBASIC3.37□□□□□ -1.87
SH3RF2Q8TEC5 HMGN2P20-201ENST00000437531 273 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms