Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 Y_RNA.287-201ENST00000364853 94 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 RNU6-1336P-201ENST00000383886 109 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 RNU6-880P-201ENST00000384526 107 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 MIR526A2-201ENST00000390198 65 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 RNA5SP31-201ENST00000411144 127 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 ATP5A1P2-201ENST00000412323 255 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 HMGB3P8-201ENST00000449709 577 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 ANP32BP2-201ENST00000454525 545 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 snoU13.6-201ENST00000458785 104 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 MIR4727-201ENST00000622232 55 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 AC009093.8-201ENST00000641769 292 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 AC106871.1-201ENST00000568324 3102 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 U8.1-201ENST00000362843 134 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 RNU6-942P-201ENST00000363002 107 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 Y_RNA.114-201ENST00000363265 113 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 Y_RNA.245-201ENST00000364493 95 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 MIR124-3-201ENST00000384866 87 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 Y_RNA.584-201ENST00000391090 114 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 Y_RNA.617-201ENST00000410920 90 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 RN7SKP53-201ENST00000411337 315 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 AC106707.2-201ENST00000484182 374 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 RPS26P15-201ENST00000488067 348 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 AC104619.4-201ENST00000510773 249 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 RNU6-65P-201ENST00000516332 98 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 CYCSP23-201ENST00000519781 313 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 AC120024.3-201ENST00000603167 156 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 MIR3674-201ENST00000636576 68 ntBASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NEDD1Q8NHV4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NEDD1Q8NHV4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NEDD1Q8NHV4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
NEDD1Q8NHV4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.34□□□□□ -1.72
NEDD1Q8NHV4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.34□□□□□ -1.72
NEDD1Q8NHV4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NEDD1Q8NHV4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
NEDD1Q8NHV4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 RNA5SP119-201ENST00000362715 117 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 U3.9-201ENST00000363823 204 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 Y_RNA.179-201ENST00000363844 90 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 RNU6-142P-201ENST00000384019 107 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 RNU6-1228P-201ENST00000391014 107 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 AL512633.1-201ENST00000399931 655 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 RNA5SP39-201ENST00000411245 120 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 AC079780.1-201ENST00000428259 207 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 AC008065.1-201ENST00000428525 348 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 AC091179.3-201ENST00000474761 144 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 RPL31P13-201ENST00000484151 370 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 RN7SKP18-201ENST00000516005 275 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 RNU6-781P-201ENST00000516377 101 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 Y_RNA.685-201ENST00000516532 108 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 AC008011.1-201ENST00000545989 227 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 AP001318.4-201ENST00000616637 121 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 AC027309.3-201ENST00000623419 351 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 AP000553.6-201ENST00000641242 118 ntBASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD1Q8NHV4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 RNU6-597P-201ENST00000365620 102 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 RNU6-1310P-201ENST00000384153 107 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 MIR549A-201ENST00000385268 96 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 MIRLET7F2-201ENST00000385277 83 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 SNORD72-201ENST00000390994 80 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 RNU4-43P-201ENST00000410628 137 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 RNU6-592P-201ENST00000411333 103 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 RPL39P29-201ENST00000447779 157 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 AL358232.1-201ENST00000448030 501 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 RPL23AP70-201ENST00000483361 460 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 Y_RNA.692-201ENST00000516627 105 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms