Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 MTCO1P29-201ENST00000496868 288 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 Y_RNA.665-201ENST00000516177 98 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 PCGEM1.1-201ENST00000613431 131 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 AL136221.1-201ENST00000621449 509 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 AC233981.2-201ENST00000611524 1614 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 ZNF702P-202ENST00000434269 1966 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 AC245060.5-201ENST00000610778 3293 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
PRPF39Q86UA1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PRPF39Q86UA1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 Y_RNA.123-201ENST00000363338 102 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 RNU6-1215P-201ENST00000384441 102 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 Y_RNA.573-201ENST00000384763 105 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PRPF39Q86UA1 RNA5SP201-201ENST00000410316 124 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 RNU6-325P-201ENST00000411132 105 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 RNA5SP450-201ENST00000411206 102 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.22□□□□□ -2.05
PRPF39Q86UA1 BX510359.4-201ENST00000423750 193 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.22□□□□□ -2.05
PRPF39Q86UA1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PRPF39Q86UA1 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 AC021146.2-201ENST00000504736 556 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 AC005741.1-201ENST00000511094 432 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.22□□□□□ -2.05
PRPF39Q86UA1 RNA5SP200-201ENST00000516360 103 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 EIF4A1P12-201ENST00000551910 141 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 AC100830.2-201ENST00000581636 240 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 AC146944.4-201ENST00000602697 718 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 AC064807.4-201ENST00000607201 407 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 AL022345.1-201ENST00000607292 135 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 AC130454.1-201ENST00000622948 401 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 SNORA43.4-201ENST00000629559 138 ntBASIC2.22□□□□□ -2.05
PRPF39Q86UA1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRPF39Q86UA1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
PRPF39Q86UA1 RNU6-254P-201ENST00000363377 107 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 RNU6-438P-201ENST00000365561 103 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 RNU6-877P-201ENST00000383868 107 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 RNU6-128P-201ENST00000383976 107 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 RNU6-378P-201ENST00000384324 107 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 SNORA51.11-201ENST00000384442 131 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 Y_RNA.554-201ENST00000384672 102 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 RNU6-332P-201ENST00000391193 108 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 RNA5SP465-201ENST00000391195 109 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 AL512604.1-201ENST00000404812 257 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 RN7SKP32-201ENST00000410167 303 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.21□□□□□ -2.06
PRPF39Q86UA1 PMCHL2-203ENST00000457791 237 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 HMGN2P26-201ENST00000463169 339 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.21□□□□□ -2.06
PRPF39Q86UA1 RNU5F-4P-201ENST00000516581 114 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.21□□□□□ -2.06
PRPF39Q86UA1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.21□□□□□ -2.06
PRPF39Q86UA1 MIR6840-201ENST00000611937 71 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
PRPF39Q86UA1 FAM157A-202ENST00000615155 405 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 AL359314.1-201ENST00000616913 261 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 MIR219B-201ENST00000637023 88 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
PRPF39Q86UA1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.21□□□□□ -2.06
PRPF39Q86UA1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PRPF39Q86UA1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PRPF39Q86UA1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PRPF39Q86UA1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.2□□□□□ -2.06
PRPF39Q86UA1 SNORD114-1-201ENST00000362705 72 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 Y_RNA.256-201ENST00000364594 104 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 RNU6-790P-201ENST00000384479 105 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 Y_RNA.530-201ENST00000384587 101 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 RNU6-1093P-201ENST00000391194 107 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 RNU6-373P-201ENST00000411247 98 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 AL030996.1-201ENST00000411430 235 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 MTND1P23-201ENST00000416931 372 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.2□□□□□ -2.06
PRPF39Q86UA1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.2□□□□□ -2.06
PRPF39Q86UA1 HMGN2P18-201ENST00000450680 270 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.2□□□□□ -2.06
PRPF39Q86UA1 RPS29P27-201ENST00000463711 170 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 TRBVA-201ENST00000498804 316 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 AC096745.1-201ENST00000509945 370 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 Y_RNA.655-201ENST00000515919 96 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.2□□□□□ -2.06
PRPF39Q86UA1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.2□□□□□ -2.06
PRPF39Q86UA1 AC090517.1-201ENST00000569307 266 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 CTHRC1P1-201ENST00000605383 469 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.2□□□□□ -2.06
PRPF39Q86UA1 SDR42E1P4-201ENST00000620894 481 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms