Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 AL138963.2-201ENST00000605137 226 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 U4.1-201ENST00000620349 87 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 AC092628.2-201ENST00000622492 339 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX53Q86TM3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
DDX53Q86TM3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DDX53Q86TM3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DDX53Q86TM3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DDX53Q86TM3 RNU6-1301P-201ENST00000362724 104 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 Y_RNA.193-201ENST00000363979 102 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 RNU4-56P-201ENST00000364700 142 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 RNU6-505P-201ENST00000384427 107 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 RNA5SP229-201ENST00000410809 99 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 RNU6-130P-201ENST00000411112 103 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.41□□□□□ -1.86
DDX53Q86TM3 AL358075.3-201ENST00000426289 226 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 FCF1P4-201ENST00000448326 183 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 snoU13.14-201ENST00000459372 104 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 AC008885.1-201ENST00000514930 301 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 RNY3P15-201ENST00000516297 97 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 SNORA40.15-201ENST00000516884 107 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.41□□□□□ -1.86
DDX53Q86TM3 HSPE1P20-201ENST00000538133 289 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 AC079598.5-201ENST00000547460 117 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 MIR5695-201ENST00000579717 85 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 AL034555.1-201ENST00000604816 211 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 AL121655.1-201ENST00000605811 308 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 AC099778.2-201ENST00000610904 211 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 MIR622-201ENST00000638396 96 ntBASIC3.41□□□□□ -1.86
DDX53Q86TM3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DDX53Q86TM3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
DDX53Q86TM3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
DDX53Q86TM3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
DDX53Q86TM3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
DDX53Q86TM3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
DDX53Q86TM3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
DDX53Q86TM3 Y_RNA.276-201ENST00000364732 109 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 Y_RNA.458-201ENST00000384240 102 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 RNU1-57P-201ENST00000384491 166 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 MIR10B-201ENST00000385011 110 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 RNA5SP213-201ENST00000391031 106 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 SDAD1P3-201ENST00000427380 333 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 RPS15AP7-201ENST00000439294 405 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 AC107083.1-201ENST00000439643 279 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX53Q86TM3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
DDX53Q86TM3 AC004817.2-201ENST00000561794 651 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 CYP4A27P-201ENST00000567218 190 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 MYL12BP1-201ENST00000569826 507 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 AL033523.1-201ENST00000605153 153 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 AC005296.1-201ENST00000616145 209 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX53Q86TM3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
DDX53Q86TM3 AL021368.2-201ENST00000606125 5352 ntBASIC3.4□□□□□ -1.87
DDX53Q86TM3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
DDX53Q86TM3 PWAR6-201ENST00000552334 4618 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
DDX53Q86TM3 Y_RNA.26-201ENST00000362539 101 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 RNU6-655P-201ENST00000362858 107 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 RNU6-770P-201ENST00000363929 105 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 Y_RNA.222-201ENST00000364264 102 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 RNA5SP139-201ENST00000364340 117 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 RNU6-806P-201ENST00000365147 105 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 RNU6-318P-201ENST00000384283 103 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 RNU6-713P-201ENST00000384761 107 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 MIR549A-201ENST00000385268 96 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 RNU6-159P-201ENST00000391080 106 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 MIR208B-201ENST00000401172 77 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 RPS26P42-201ENST00000413485 326 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX53Q86TM3 AC096638.1-201ENST00000444678 216 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 AL121594.1-201ENST00000475906 575 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 AC067942.3-201ENST00000512025 362 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 RNU6-1198P-201ENST00000516904 67 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 MIR3923-201ENST00000579521 83 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 AC125232.2-201ENST00000592457 143 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DDX53Q86TM3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DDX53Q86TM3 AC091564.4-201ENST00000533934 2194 ntBASIC3.39□□□□□ -1.87
DDX53Q86TM3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
DDX53Q86TM3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX53Q86TM3 AL359854.1-201ENST00000614203 1594 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DDX53Q86TM3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.38□□□□□ -1.87
DDX53Q86TM3 Y_RNA.19-201ENST00000362462 99 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 RNA5SP361-201ENST00000362686 118 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 Y_RNA.64-201ENST00000362845 102 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 RNU6-137P-201ENST00000363680 108 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 SNORD115-8-201ENST00000363856 82 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 RNU6-702P-201ENST00000364982 107 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 SNORD115-38-201ENST00000365037 82 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.38□□□□□ -1.87
DDX53Q86TM3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 RNU6-1093P-201ENST00000391194 107 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms