Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 AL360085.1-201ENST00000604713 532 ntBASIC3.37□□□□□ -1.87
RNF180Q86T96 AL355802.3-201ENST00000607571 545 ntBASIC3.37□□□□□ -1.87
RNF180Q86T96 AC069294.1-201ENST00000608397 350 ntBASIC3.37□□□□□ -1.87
RNF180Q86T96 AL450472.1-202ENST00000637286 180 ntBASIC3.37□□□□□ -1.87
RNF180Q86T96 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF180Q86T96 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF180Q86T96 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RNF180Q86T96 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RNF180Q86T96 AC062016.1-201ENST00000355719 319 ntBASIC3.36□□□□□ -1.87
RNF180Q86T96 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RNF180Q86T96 RNU6-137P-201ENST00000363680 108 ntBASIC3.36□□□□□ -1.87
RNF180Q86T96 RNU6-1160P-201ENST00000384546 104 ntBASIC3.36□□□□□ -1.87
RNF180Q86T96 Y_RNA.526-201ENST00000384572 110 ntBASIC3.36□□□□□ -1.87
RNF180Q86T96 U6atac.2-201ENST00000408644 118 ntBASIC3.36□□□□□ -1.87
RNF180Q86T96 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF180Q86T96 RPS12P18-201ENST00000442381 270 ntBASIC3.36□□□□□ -1.87
RNF180Q86T96 RNA5SP54-201ENST00000516951 92 ntBASIC3.36□□□□□ -1.87
RNF180Q86T96 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF180Q86T96 AC105245.1-201ENST00000581934 244 ntBASIC3.36□□□□□ -1.87
RNF180Q86T96 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF180Q86T96 AL606534.2-204ENST00000635008 178 ntBASIC3.36□□□□□ -1.87
RNF180Q86T96 MIR7153-201ENST00000637758 57 ntBASIC3.36□□□□□ -1.87
RNF180Q86T96 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.36□□□□□ -1.87
RNF180Q86T96 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.36□□□□□ -1.87
RNF180Q86T96 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF180Q86T96 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF180Q86T96 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF180Q86T96 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF180Q86T96 AC069528.2-201ENST00000624849 1991 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF180Q86T96 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF180Q86T96 Y_RNA.80-201ENST00000362996 102 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 Y_RNA.148-201ENST00000363557 117 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 SNORA63C-201ENST00000364578 129 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 RNU4-42P-201ENST00000364738 142 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 Y_RNA.319-201ENST00000365138 92 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 Y_RNA.496-201ENST00000384444 101 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 RNU6-738P-201ENST00000384531 106 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 MTCO3P19-201ENST00000415864 321 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 AL513477.1-202ENST00000417061 214 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 AC114482.1-201ENST00000418010 247 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 MTND2P23-201ENST00000422990 651 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 OOSP1P1-201ENST00000423265 274 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 AC002075.2-201ENST00000425207 252 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 AC063976.3-201ENST00000426849 329 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF180Q86T96 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF180Q86T96 ANXA2P1-201ENST00000505539 926 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 RNU6-327P-201ENST00000516270 127 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 RNU6-911P-201ENST00000516523 104 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF180Q86T96 HSBP1P1-201ENST00000555205 166 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF180Q86T96 VN1R91P-201ENST00000594377 169 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 AC007485.1-201ENST00000616755 206 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 MTND5P27-201ENST00000428871 1720 ntBASIC3.35□□□□□ -1.87
RNF180Q86T96 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF180Q86T96 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF180Q86T96 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF180Q86T96 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
RNF180Q86T96 AC005592.1-201ENST00000566527 1640 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 RNU4-82P-201ENST00000362443 140 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 MIR218-1-201ENST00000384999 110 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 MRPL42P3-201ENST00000401492 326 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF180Q86T96 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RNF180Q86T96 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF180Q86T96 USP9YP16-201ENST00000430287 407 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.34□□□□□ -1.87
RNF180Q86T96 AL109933.2-201ENST00000452651 260 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 USP9YP23-201ENST00000455085 407 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF180Q86T96 snoU13.6-201ENST00000458785 104 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 RNU7-169P-201ENST00000459456 61 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 AC140059.1-201ENST00000489238 361 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 RNU6-1045P-201ENST00000516321 107 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF180Q86T96 AL078605.1-201ENST00000603529 500 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 AC005520.5-201ENST00000613926 164 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 MIR6715A-201ENST00000615929 79 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 AC090517.3-201ENST00000625170 141 ntBASIC3.34□□□□□ -1.87
RNF180Q86T96 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF180Q86T96 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
RNF180Q86T96 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.34□□□□□ -1.88
RNF180Q86T96 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF180Q86T96 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF180Q86T96 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF180Q86T96 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF180Q86T96 RPL30P4-201ENST00000429309 333 ntBASIC3.33□□□□□ -1.88
RNF180Q86T96 AC087499.2-201ENST00000432861 149 ntBASIC3.33□□□□□ -1.88
RNF180Q86T96 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF180Q86T96 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF180Q86T96 AC006539.3-201ENST00000454258 129 ntBASIC3.33□□□□□ -1.88
RNF180Q86T96 AC080013.2-201ENST00000460866 323 ntBASIC3.33□□□□□ -1.88
RNF180Q86T96 CKS1BP2-201ENST00000497342 240 ntBASIC3.33□□□□□ -1.88
RNF180Q86T96 SNORA40.14-201ENST00000516543 86 ntBASIC3.33□□□□□ -1.88
RNF180Q86T96 Y_RNA.721-201ENST00000517207 102 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms