Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC010297.1-201ENST00000623948 149 ntBASIC2.6□□□□□ -1.99
RUNDC3AQ59EK9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.6□□□□□ -1.99
RUNDC3AQ59EK9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.6□□□□□ -1.99
RUNDC3AQ59EK9 AC069528.2-201ENST00000624849 1991 ntBASIC2.6□□□□□ -1.99
RUNDC3AQ59EK9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 MTND5P10-201ENST00000603719 1809 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 RNU4-56P-201ENST00000364700 142 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 RNA5SP125-201ENST00000364843 120 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 RNU6-1040P-201ENST00000383974 107 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 U8.10-201ENST00000384260 133 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 MIR487A-201ENST00000385009 80 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 MIR559-201ENST00000385188 96 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 HMGB3P2-201ENST00000411913 584 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 AC003685.2-201ENST00000422795 395 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 MTND4P28-201ENST00000426217 387 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 RPL23AP50-201ENST00000434149 455 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 RPL23AP83-201ENST00000434984 473 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 AC104389.3-201ENST00000445629 235 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 AP002404.1-201ENST00000532005 451 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 AC022080.3-201ENST00000544433 482 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 MIR3923-201ENST00000579521 83 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 AL138963.2-201ENST00000605137 226 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 AC005520.5-201ENST00000613926 164 ntBASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.59□□□□□ -1.99
RUNDC3AQ59EK9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RUNDC3AQ59EK9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.59□□□□□ -2
RUNDC3AQ59EK9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
RUNDC3AQ59EK9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.58□□□□□ -2
RUNDC3AQ59EK9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
RUNDC3AQ59EK9 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 Y_RNA.146-201ENST00000363549 102 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 RNU6-944P-201ENST00000364023 107 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 SNORD115-32-201ENST00000364079 82 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 Y_RNA.431-201ENST00000384086 102 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 SNORA9-201ENST00000384215 133 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 RNU6-378P-201ENST00000384324 107 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 MIR29B2-201ENST00000385055 81 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 MIR95-201ENST00000385072 81 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 SNORA12.2-201ENST00000391040 156 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 SNORA12-201ENST00000391162 147 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 RPS20P15-201ENST00000412792 311 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 RPS26P42-201ENST00000413485 326 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 snoU13.30-201ENST00000458951 104 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 RN7SKP210-201ENST00000459176 261 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 RPL17P19-201ENST00000489069 552 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 AC090096.1-201ENST00000489168 390 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.58□□□□□ -2
RUNDC3AQ59EK9 RNU6-470P-201ENST00000515954 104 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 SNORA74D-201ENST00000516404 141 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 RNU6-586P-201ENST00000517265 104 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.58□□□□□ -2
RUNDC3AQ59EK9 PCGEM1.1-201ENST00000613431 131 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 MIR5739-201ENST00000619803 80 ntBASIC2.58□□□□□ -2
RUNDC3AQ59EK9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.58□□□□□ -2
RUNDC3AQ59EK9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
RUNDC3AQ59EK9 AC073544.1-201ENST00000600110 1595 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.57□□□□□ -2
RUNDC3AQ59EK9 Y_RNA.11-201ENST00000362375 109 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 RNU6-1115P-201ENST00000362490 106 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 Y_RNA.813-201ENST00000364639 102 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 Y_RNA.405-201ENST00000383979 100 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 Y_RNA.451-201ENST00000384200 100 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 Y_RNA.524-201ENST00000384564 100 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 Y_RNA.561-201ENST00000384694 100 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 MIR208B-201ENST00000401172 77 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.57□□□□□ -2
RUNDC3AQ59EK9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
RUNDC3AQ59EK9 AC112220.1-201ENST00000434628 355 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 OR2AQ1P-201ENST00000451972 200 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 AC027575.1-201ENST00000481064 460 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 AC068781.1-201ENST00000488231 618 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.57□□□□□ -2
RUNDC3AQ59EK9 CBX3P7-201ENST00000532876 502 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 AC104581.2-201ENST00000572227 430 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 AL356575.1-201ENST00000603008 283 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.57□□□□□ -2
RUNDC3AQ59EK9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.57□□□□□ -2
RUNDC3AQ59EK9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RUNDC3AQ59EK9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.57□□□□□ -2
RUNDC3AQ59EK9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.56□□□□□ -2
RUNDC3AQ59EK9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
RUNDC3AQ59EK9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
RUNDC3AQ59EK9 RNU6-874P-201ENST00000362390 105 ntBASIC2.56□□□□□ -2
RUNDC3AQ59EK9 SNORD42.2-201ENST00000365570 69 ntBASIC2.56□□□□□ -2
RUNDC3AQ59EK9 MIR32-201ENST00000384965 70 ntBASIC2.56□□□□□ -2
RUNDC3AQ59EK9 AL138885.1-201ENST00000405921 675 ntBASIC2.56□□□□□ -2
RUNDC3AQ59EK9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.56□□□□□ -2
RUNDC3AQ59EK9 AL161788.1-201ENST00000441805 169 ntBASIC2.56□□□□□ -2
RUNDC3AQ59EK9 TOMM22P6-201ENST00000465035 409 ntBASIC2.56□□□□□ -2
RUNDC3AQ59EK9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.56□□□□□ -2
RUNDC3AQ59EK9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.56□□□□□ -2
RUNDC3AQ59EK9 SUB1P3-201ENST00000564581 315 ntBASIC2.56□□□□□ -2
RUNDC3AQ59EK9 AC023824.2-201ENST00000566185 400 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms